RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 GZMKP49863 264 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 MRPL49Q13405 166 aaKnown RBP6.39□□□□□ -1.39
VPS50-213ENST00000477572 PLEKHG4Q58EX7 1191 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 DDX46Q7L014 1031 aaKnown RBP6.39□□□□□ -1.39
VPS50-213ENST00000477572 RNF180Q86T96 592 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 LDLRAD3Q86YD5 345 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 SLC41A1Q8IVJ1 513 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 CMIPQ8IY22 773 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 GLB1L3Q8NCI6 653 aaPredicted RBP6.39□□□□□ -1.39
VPS50-213ENST00000477572 OR14C36Q8NHC7 312 aa6.39□□□□□ -1.39
VPS50-213ENST00000477572 FAM193BQ96PV7 902 aaPredicted RBP6.39□□□□□ -1.39
VPS50-213ENST00000477572 EIF2B4Q9UI10 523 aaKnown RBP6.39□□□□□ -1.39
VPS50-213ENST00000477572 WDR33Q9C0J8 1336 aaKnown RBP6.39□□□□□ -1.39
VPS50-213ENST00000477572 A0A087X1B8 175 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 OVOL3O00110 214 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 TMEM127O75204 238 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 NR4A1P22736 598 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 APOBEC3AP31941 199 aaPredicted RBP6.38□□□□□ -1.39
VPS50-213ENST00000477572 INHBCP55103 352 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 CCT2P78371 535 aaKnown RBP6.38□□□□□ -1.39
VPS50-213ENST00000477572 FSTL1Q12841 308 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 HTR3DQ70Z44 454 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 THNSL2Q86YJ6 484 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 AMER2Q8N7J2 671 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 CLRN3Q8NCR9 226 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 TGFBRAP1Q8WUH2 860 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 HAS1Q92839 578 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 TTPALQ9BTX7 342 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 MLST8Q9BVC4 326 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 ZNF768Q9H5H4 540 aaKnown RBP6.38□□□□□ -1.39
VPS50-213ENST00000477572 IFT22Q9H7X7 185 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 SPON1Q9HCB6 807 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 CDY2AQ9Y6F7 541 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 ZMYM3Q14202 1370 aa6.38□□□□□ -1.39
VPS50-213ENST00000477572 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.37□□□□□ -1.39
VPS50-213ENST00000477572 PEX11BO96011 259 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 LTA4HP09960 611 aaKnown RBP6.37□□□□□ -1.39
VPS50-213ENST00000477572 KRT4P19013 534 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 CDK17Q00537 523 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 APBA1Q02410 837 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 DHCR24Q15392 516 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 UGT8Q16880 541 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 CCDC178Q5BJE1 867 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 DCAF17Q5H9S7 520 aaPredicted RBP6.37□□□□□ -1.39
VPS50-213ENST00000477572 ANKS6Q68DC2 871 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 GIMAP6Q6P9H5 292 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 Q6ZPA2 131 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 MRGPREQ86SM8 312 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 FAM83AQ86UY5 434 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 VRK3Q8IV63 474 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 RPUSD2Q8IZ73 545 aaKnown RBP6.37□□□□□ -1.39
VPS50-213ENST00000477572 OR52N2Q8NGI0 321 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 MDM1Q8TC05 714 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 TTC1Q99614 292 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 C11orf21Q9P2W6 132 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 DPP7Q9UHL4 492 aa6.37□□□□□ -1.39
VPS50-213ENST00000477572 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.37□□□□□ -1.39
VPS50-213ENST00000477572 VPS72Q15906 364 aa6.36□□□□□ -1.39
VPS50-213ENST00000477572 NAIF1Q69YI7 327 aaPredicted RBP6.36□□□□□ -1.39
VPS50-213ENST00000477572 CDC5LQ99459 802 aaKnown RBP6.36□□□□□ -1.39
VPS50-213ENST00000477572 WNT8AQ9H1J5 351 aa6.36□□□□□ -1.39
VPS50-213ENST00000477572 VTA1Q9NP79 307 aa6.36□□□□□ -1.39
VPS50-213ENST00000477572 TLDC2A0PJX2 215 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 LEFTY2O00292 366 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 ADCY6O43306 1168 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 ITGA10O75578 1167 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 HSP90B1P14625 803 aaKnown RBP6.35□□□□□ -1.39
VPS50-213ENST00000477572 GYPEP15421 78 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 CTSSP25774 331 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 PTGS2P35354 604 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 FAM189BP81408 668 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 CSRP2Q16527 193 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 MRGPRGQ86SM5 289 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 SYNE4Q8N205 404 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 LILRA3Q8N6C8 439 aaPredicted RBP6.35□□□□□ -1.39
VPS50-213ENST00000477572 FBXO18Q8NFZ0 1043 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 RSAD2Q8WXG1 361 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 KCNH6Q9H252 994 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 TRPM5Q9NZQ8 1165 aa6.35□□□□□ -1.39
VPS50-213ENST00000477572 AHRRA9YTQ3 701 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 PRR5-ARHGAP8B1AHC4 643 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 ZEB2O60315 1214 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 RAMP2O60895 175 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 RECQL4O94761 1208 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 ZFP36P26651 326 aaKnown RBP6.34□□□□□ -1.39
VPS50-213ENST00000477572 ADSLP30566 484 aaPredicted RBP6.34□□□□□ -1.39
VPS50-213ENST00000477572 WNT3AP56704 352 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 SCAND1P57086 179 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 FSCN1Q16658 493 aaKnown RBP6.34□□□□□ -1.39
VPS50-213ENST00000477572 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.34□□□□□ -1.39
VPS50-213ENST00000477572 TAF7LQ5H9L4 462 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 LAIR1Q6GTX8 287 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 ULK2Q8IYT8 1036 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 RNF169Q8NCN4 708 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 PROKR1Q8TCW9 393 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 SNX33Q8WV41 574 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 NDC1Q9BTX1 674 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 TEX101Q9BY14 249 aa6.34□□□□□ -1.39
VPS50-213ENST00000477572 QRSL1Q9H0R6 528 aaKnown RBP6.34□□□□□ -1.39
VPS50-213ENST00000477572 SLKQ9H2G2 1235 aaPredicted RBP6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms