RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 THEMISQ8N1K5 641 aaPredicted RBP4.41□□□□□ -1.7
TARDBP-208ENST00000477447 CPA6Q8N4T0 437 aa4.41□□□□□ -1.7
TARDBP-208ENST00000477447 GPR156Q8NFN8 814 aa4.41□□□□□ -1.7
TARDBP-208ENST00000477447 NRG4Q8WWG1 115 aa4.41□□□□□ -1.7
TARDBP-208ENST00000477447 TMEM176AQ96HP8 235 aa4.41□□□□□ -1.7
TARDBP-208ENST00000477447 AGO3Q9H9G7 860 aaKnown RBP4.41□□□□□ -1.7
TARDBP-208ENST00000477447 RBM12Q9NTZ6 932 aaKnown RBP4.41□□□□□ -1.7
TARDBP-208ENST00000477447 SAP30BPQ9UHR5 308 aaKnown RBP4.41□□□□□ -1.7
TARDBP-208ENST00000477447 SCOCQ9UIL1 159 aa4.41□□□□□ -1.7
TARDBP-208ENST00000477447 E2F8A0AVK6 867 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 UBE2QL1A1L167 161 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 GPR42O15529 346 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 PHF2O75151 1096 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 ZRANB2O95218 330 aaKnown RBP eCLIP4.4□□□□□ -1.714e-10■□□□□ 10.1
TARDBP-208ENST00000477447 PF4V1P10720 104 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 GSPT1P15170 499 aaKnown RBP4.4□□□□□ -1.71
TARDBP-208ENST00000477447 GYPEP15421 78 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 NPEPPSP55786 919 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 DUSP8Q13202 625 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 FBLN7Q53RD9 439 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 C19orf54Q5BKX5 351 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 CMTM4Q8IZR5 234 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 OR5M3Q8NGP4 307 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 DPF2Q92785 391 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 ARL8AQ96BM9 186 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 C20orf173Q96LM9 149 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 UHRF1Q96T88 793 aaPredicted RBP4.4□□□□□ -1.71
TARDBP-208ENST00000477447 RTFDC1Q9BY42 306 aaPredicted RBP4.4□□□□□ -1.71
TARDBP-208ENST00000477447 KRTAP4-7Q9BYR0 210 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 CSRNP2Q9H175 543 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 METTL14Q9HCE5 456 aaKnown RBP4.4□□□□□ -1.71
TARDBP-208ENST00000477447 GPRC5DQ9NZD1 345 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 ZIM2Q9NZV7 527 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 SERPINB13Q9UIV8 391 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 ZNF180Q9UJW8 692 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 INTUQ9ULD6 942 aa4.4□□□□□ -1.71
TARDBP-208ENST00000477447 PMS2P1A4D2B8 440 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 FAM171A2A8MVW0 826 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ADCY6O43306 1168 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ITGA10O75578 1167 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ENDOD1O94919 500 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ABLIM3O94929 683 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 SCGB1D2O95969 90 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ZSCAN20P17040 1043 aaPredicted RBP4.39□□□□□ -1.71
TARDBP-208ENST00000477447 RPS19P39019 145 aaKnown RBP4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ADKP55263 362 aaKnown RBP4.39□□□□□ -1.71
TARDBP-208ENST00000477447 CTSWP56202 376 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 PER3P56645 1201 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 MGAT2Q10469 447 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 GRM7Q14831 915 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 GJC2Q5T442 439 aaPredicted RBP4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ERICH6BQ5W0A0 696 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 TCTN3Q6NUS6 607 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 Q6ZVL8 140 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 MIGA2Q7L4E1 593 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 FUKQ8N0W3 1084 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 MIER2Q8N344 545 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 LILRA3Q8N6C8 439 aaPredicted RBP4.39□□□□□ -1.71
TARDBP-208ENST00000477447 OR2I1PQ8NGU4 316 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 HSPBAP1Q96EW2 488 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 CDC5LQ99459 802 aaKnown RBP4.39□□□□□ -1.71
TARDBP-208ENST00000477447 TCF25Q9BQ70 676 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 RHOBTB2Q9BYZ6 727 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 CDH19Q9H159 772 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 EPC1Q9H2F5 836 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 NELFAQ9H3P2 528 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 MSL2Q9HCI7 577 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 TRPS1Q9UHF7 1281 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 TCEAL9Q9UHQ7 104 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 ZFR2Q9UPR6 939 aaKnown RBP4.39□□□□□ -1.71
TARDBP-208ENST00000477447 GIT1Q9Y2X7 761 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 EID1Q9Y6B2 187 aa4.39□□□□□ -1.71
TARDBP-208ENST00000477447 CCDC154A6NI56 674 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 FOXS1O43638 330 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 RAD17O75943 681 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 STC2O76061 302 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 ITGB3P05106 788 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 CRHR1P34998 444 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 MSX2P35548 267 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-208ENST00000477447 PLP2Q04941 152 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 SEPT2Q15019 361 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 PPP2R5AQ15172 486 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 LRRC41Q15345 812 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 FAM214AQ32MH5 1076 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 C3orf36Q3SXR2 165 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 PRAMEF14Q5SWL7 426 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 LCE1DQ5T752 114 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 PQLC1Q8N2U9 271 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 REPS2Q8NFH8 660 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 FBXO18Q8NFZ0 1043 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 OR7D4Q8NG98 312 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 MDM1Q8TC05 714 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 JPH3Q8WXH2 748 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-208ENST00000477447 HOXB13Q92826 284 aaPredicted RBP4.38□□□□□ -1.71
TARDBP-208ENST00000477447 HDAC10Q969S8 669 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 COA7Q96BR5 231 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 IL17RAQ96F46 866 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 C7orf25Q9BPX7 421 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 PDCD2LQ9BRP1 358 aa4.38□□□□□ -1.71
TARDBP-208ENST00000477447 SSBP3Q9BWW4 388 aaPredicted RBP4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms