RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 C8orf74Q6P047 294 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 RASGEF1CQ8N431 466 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 SLC35G2Q8TBE7 412 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 SCFD2Q8WU76 684 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 ARHGEF26Q96DR7 871 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 OSGEPQ9NPF4 335 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 GDF3Q9NR23 364 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 ADARB2Q9NS39 739 aaKnown RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 NOCTQ9UK39 431 aaKnown RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 DDNO94850 711 aaPredicted RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 GARTP22102 1010 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 GTF2H1P32780 548 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 DNA2P51530 1060 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 HADHBP55084 474 aaKnown RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 MRPS25P82663 173 aaKnown RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 BRDTQ58F21 947 aaPredicted RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 KRT39Q6A163 491 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 SYCE1Q8N0S2 351 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 METTL13Q8N6R0 699 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 HELQQ8TDG4 1101 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 LMBR1Q8WVP7 490 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 POLR3FQ9H1D9 316 aaPredicted RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 ISCUQ9H1K1 167 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 A0A0G2JLL6 359 aaPredicted RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 ANKRD62A6NC57 917 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 ADM5C9JUS6 153 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 KCNK3O14649 394 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 SORBS3O60504 671 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 CHRNB2P17787 502 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 TNFAIP3P21580 790 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 SP4Q02446 784 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 MAP2K1Q02750 393 aaPredicted RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 EMC2Q15006 297 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 CYFIP1Q7L576 1253 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 PRRT2Q7Z6L0 340 aaPredicted RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 EPS8L1Q8TE68 723 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 SHC3Q92529 594 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 NIFKQ9BYG3 293 aaKnown RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 THAP2Q9H0W7 228 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 DHX33Q9H6R0 707 aaKnown RBP12.44□□□□□ -0.42
NUP188-205ENST00000477069 COG5Q9UP83 839 aa12.44□□□□□ -0.42
NUP188-205ENST00000477069 SOWAHBA6NEL2 793 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 BHMG1C9JSJ3 638 aaPredicted RBP12.43□□□□□ -0.42
NUP188-205ENST00000477069 IRF6O14896 467 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 BUB1BO60566 1050 aaPredicted RBP12.43□□□□□ -0.42
NUP188-205ENST00000477069 CNMDO75829 334 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 SYF2O95926 243 aaKnown RBP12.43□□□□□ -0.42
NUP188-205ENST00000477069 OATP04181 439 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 GLI1P08151 1106 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 CLDN10P78369 228 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 C15orf39Q6ZRI6 1047 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 GPD1LQ8N335 351 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 TAF4BQ92750 862 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 PCYT2Q99447 389 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 POP1Q99575 1024 aaKnown RBP12.43□□□□□ -0.42
NUP188-205ENST00000477069 ZNF302Q9NR11 478 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 TOPORSQ9NS56 1045 aaPredicted RBP12.43□□□□□ -0.42
NUP188-205ENST00000477069 FBXO40Q9UH90 709 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 STYXL1Q9Y6J8 313 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 TMCO5BA8MYB1 307 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 UBA1P22314 1058 aaKnown RBP12.43□□□□□ -0.42
NUP188-205ENST00000477069 ABCD1P33897 745 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 GPS2Q13227 327 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 MTERF2Q49AM1 385 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.43□□□□□ -0.42
NUP188-205ENST00000477069 PEX26Q7Z412 305 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 DAAM2Q86T65 1068 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 ANKRD35Q8N283 1001 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 PROCA1Q8NCQ7 364 aaPredicted RBP12.43□□□□□ -0.42
NUP188-205ENST00000477069 CAVIN3Q969G5 261 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 HINFPQ9BQA5 517 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 MED4Q9NPJ6 270 aa12.43□□□□□ -0.42
NUP188-205ENST00000477069 H0YCG3 227 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 AGPSO00116 658 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 DDX3YO15523 660 aaKnown RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 FARP2O94887 1054 aaPredicted RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 PIGRP01833 764 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 CYP2C19P33261 490 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 ARL2P36404 184 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 PRPF4BQ13523 1007 aaKnown RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 NOP9Q86U38 636 aaKnown RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 FAM71BQ8TC56 605 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 CTNNBL1Q8WYA6 563 aaPredicted RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 POMGNT1Q8WZA1 660 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 CCDC127Q96BQ5 260 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 CALR3Q96L12 384 aaKnown RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 PCDHB18PQ96TA0 734 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 SPATC1LQ9H0A9 340 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 PORCNQ9H237 461 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 PRDM4Q9UKN5 801 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 GSTTP1A0A1W2PQM5 241 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 HNRNPDLO14979 420 aaKnown RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 SGPL1O95470 568 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 TNNT3P45378 269 aaPredicted RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 EPHB4P54760 987 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 TARBP2Q15633 366 aaKnown RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 RPUSD2Q8IZ73 545 aaKnown RBP12.42□□□□□ -0.42
NUP188-205ENST00000477069 ASAP3Q8TDY4 903 aa12.42□□□□□ -0.42
NUP188-205ENST00000477069 TAS1R2Q8TE23 839 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms