RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 STRA6Q9BX79 667 aa13.1□□□□□ -0.31
XPC-205ENST00000476581 MEFVO15553 781 aaPredicted RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 PPP1R37O75864 691 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 KIAA0754O94854 1291 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 MMP3P08254 477 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 NPTX2P47972 431 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 CASP4P49662 377 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 GNGT1P63211 74 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 SP3Q02447 781 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 HIC1Q14526 733 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 CCDC155Q8N6L0 562 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 OTUD6BQ8N6M0 293 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 PPTC7Q8NI37 304 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 RNF217Q8TC41 542 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 ODF2LQ9ULJ1 636 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 TRIP12Q14669 1992 aaPredicted RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 K7ENM7 598 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 PLS3P13797 630 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 ARHGAP25P42331 645 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 FCGRTP55899 365 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 TAS1R3Q7RTX0 852 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 YTHDF3Q7Z739 585 aaKnown RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 FMNL3Q8IVF7 1028 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 ZNF507Q8TCN5 953 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 CNOT6LQ96LI5 555 aaKnown RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 PPP1R16BQ96T49 567 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 NIFKQ9BYG3 293 aaKnown RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 POLR3FQ9H1D9 316 aaPredicted RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 DHX33Q9H6R0 707 aaKnown RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 AZI2Q9H6S1 392 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 TTLL13PA6NNM8 815 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 KLK7P49862 253 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 POLGP54098 1239 aaPredicted RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 KNOP1Q1ED39 458 aaKnown RBP13.09□□□□□ -0.31
XPC-205ENST00000476581 OTUD6AQ7L8S5 288 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 KCTD17Q8N5Z5 321 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 KCND2Q9NZV8 630 aa13.09□□□□□ -0.31
XPC-205ENST00000476581 LAMA3Q16787 3333 aa13.08□□□□□ -0.31
XPC-205ENST00000476581 CCDC169A6NNP5 214 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 IRX1P78414 480 aaPredicted RBP13.08□□□□□ -0.32
XPC-205ENST00000476581 LAMC2Q13753 1193 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 TRPC6Q9Y210 931 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 EMSYQ7Z589 1322 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 A0A1B0GTH6 734 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 RNF225M0QZC1 329 aaPredicted RBP13.08□□□□□ -0.32
XPC-205ENST00000476581 ALDH1A1P00352 501 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 GLRA2P23416 452 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 CCND3P30281 292 aaPredicted RBP13.08□□□□□ -0.32
XPC-205ENST00000476581 MIIPQ5JXC2 388 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 TLK2Q86UE8 772 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 TMEM161BQ8NDZ6 487 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 SOCS4Q8WXH5 440 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 ATP6V0A4Q9HBG4 840 aa13.08□□□□□ -0.32
XPC-205ENST00000476581 GOLGA6BA6NDN3 693 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 GOLGA8KD6RF30 607 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 CSDE1O75534 798 aaKnown RBP13.07□□□□□ -0.32
XPC-205ENST00000476581 NEBLO76041 1014 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 FECHP22830 423 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 CLCN3P51790 818 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 SMTNP53814 917 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 SKOR1P84550 965 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 CACNB2Q08289 660 aaPredicted RBP13.07□□□□□ -0.32
XPC-205ENST00000476581 FAM160B1Q5W0V3 765 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 IQSEC1Q6DN90 963 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 ATP8B4Q8TF62 1192 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 EMID1Q96A84 441 aaPredicted RBP13.07□□□□□ -0.32
XPC-205ENST00000476581 SELENOOQ9BVL4 669 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 KLC4Q9NSK0 619 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 DGAT1O75907 488 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 PGK1P00558 417 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 INSRRP14616 1297 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 GAP43P17677 238 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 PAX7P23759 505 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 COPB1P53618 953 aaKnown RBP13.07□□□□□ -0.32
XPC-205ENST00000476581 BMT2Q1RMZ1 405 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 PLPPR4Q7Z2D5 763 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 HAUS6Q7Z4H7 955 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 PPFIBP1Q86W92 1011 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 PCIF1Q9H4Z3 704 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 SLC5A4Q9NY91 659 aa13.07□□□□□ -0.32
XPC-205ENST00000476581 LIMA1Q9UHB6 759 aaKnown RBP13.07□□□□□ -0.32
XPC-205ENST00000476581 ANKRD63C9JTQ0 380 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 AKAP3O75969 853 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 NCKAP1LP55160 1127 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 APBA1Q02410 837 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 RBL2Q08999 1139 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 SLC39A4Q6P5W5 647 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 ZNF296Q8WUU4 475 aaPredicted RBP13.06□□□□□ -0.32
XPC-205ENST00000476581 H3BRB1 525 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 NDUFAB1O14561 156 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 RASSF9O75901 435 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 CYBAP13498 195 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 NR2F2P24468 414 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 CNGA1P29973 690 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 MARCH8Q5T0T0 291 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 CCNI2Q6ZMN8 369 aaPredicted RBP13.06□□□□□ -0.32
XPC-205ENST00000476581 MICALCLQ6ZW33 695 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 TRAPPC11Q7Z392 1133 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 CCDC51Q96ER9 411 aa13.06□□□□□ -0.32
XPC-205ENST00000476581 FAM84AQ96KN4 292 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms