RNA–Protein interactions for RNA: ENST00000476387.1

COL1A1-205, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 600 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-205ENST00000476387 IRAK3Q9Y616 596 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 MYH11P35749 1972 aa17.95■□□□□ 0.46
COL1A1-205ENST00000476387 GALTP07902 379 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 NCLP19338 710 aaKnown RBP17.94■□□□□ 0.46
COL1A1-205ENST00000476387 TPRNQ4KMQ1 711 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 LLGL2Q6P1M3 1020 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 VPS52Q8N1B4 723 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 ASAP3Q8TDY4 903 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 INTS4Q96HW7 963 aaKnown RBP17.94■□□□□ 0.46
COL1A1-205ENST00000476387 NFKBIZQ9BYH8 718 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 ZBP1Q9H171 429 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 RSAD1Q9HA92 442 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 UBN1Q9NPG3 1134 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 KANSL3Q9P2N6 904 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 MYH15Q9Y2K3 1946 aa17.94■□□□□ 0.46
COL1A1-205ENST00000476387 INO80B-WBP1J3KQ70 363 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 CLASP2O75122 1294 aaKnown RBP17.93■□□□□ 0.46
COL1A1-205ENST00000476387 CXCL14O95715 111 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 CTSAP10619 480 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 ARL2P36404 184 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 NCBP1Q09161 790 aaKnown RBP17.93■□□□□ 0.46
COL1A1-205ENST00000476387 CAPSQ13938 189 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 PADI6Q6TGC4 694 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 MAEAQ7L5Y9 396 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 TMEM173Q86WV6 379 aaPredicted RBP17.93■□□□□ 0.46
COL1A1-205ENST00000476387 EDAQ92838 391 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 DDX19AQ9NUU7 478 aaKnown RBP17.93■□□□□ 0.46
COL1A1-205ENST00000476387 KIAA1024Q9UPX6 916 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 HCFC2Q9Y5Z7 792 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 TECTAO75443 2155 aa17.93■□□□□ 0.46
COL1A1-205ENST00000476387 PIEZO1Q92508 2521 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 INPPL1O15357 1258 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 TSPAN1O60635 241 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 BMP15O95972 392 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 GLRA2P23416 452 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 SLC11A1P49279 550 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 ITIH3Q06033 890 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 ARL6IP4Q66PJ3 421 aaKnown RBP17.92■□□□□ 0.46
COL1A1-205ENST00000476387 NOTUMQ6P988 496 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 ZNF280BQ86YH2 543 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 BCL7CQ8WUZ0 217 aaPredicted RBP17.92■□□□□ 0.46
COL1A1-205ENST00000476387 RPGRIP1Q96KN7 1286 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 TMEM175Q9BSA9 504 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 GBP3Q9H0R5 595 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 BHMT2Q9H2M3 363 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 DNAJB4Q9UDY4 337 aa17.92■□□□□ 0.46
COL1A1-205ENST00000476387 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-205ENST00000476387 VWA3AA6NCI4 1184 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 LRRIQ4A6NIV6 560 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 PP2D1A8MPX8 630 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 ITGA4P13612 1032 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 MBTD1Q05BQ5 628 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 HSCBQ8IWL3 235 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 TMEM87AQ8NBN3 555 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 SMG8Q8ND04 991 aaKnown RBP17.91■□□□□ 0.46
COL1A1-205ENST00000476387 NECTIN4Q96NY8 510 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 FAM193BQ96PV7 902 aaPredicted RBP17.91■□□□□ 0.46
COL1A1-205ENST00000476387 ADAM7Q9H2U9 754 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 GPRC5CQ9NQ84 441 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 FOXD4L1Q9NU39 408 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 DZANK1Q9NVP4 752 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 DNM3Q9UQ16 869 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 IPPQ9Y573 584 aa17.91■□□□□ 0.46
COL1A1-205ENST00000476387 TDRD15B5MCY1 1934 aaKnown RBP17.9■□□□□ 0.46
COL1A1-205ENST00000476387 B4GALT3O60512 393 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 DDHD2O94830 711 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 ALDH2P05091 517 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 CYP11B2P19099 503 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 CDC25AP30304 524 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 CA8P35219 290 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 ZRSR1Q15695 479 aaKnown RBP17.9■□□□□ 0.46
COL1A1-205ENST00000476387 IL17AQ16552 155 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 ECM1Q16610 540 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 AMHR2Q16671 573 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 CES5AQ6NT32 575 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 ZBTB8OSQ8IWT0 167 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 SNX21Q969T3 373 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 CDK5RAP3Q96JB5 506 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 VN1R3Q9BXE9 311 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 EIF2AQ9BY44 585 aaKnown RBP17.9■□□□□ 0.46
COL1A1-205ENST00000476387 CSRNP2Q9H175 543 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 KCNH6Q9H252 994 aa17.9■□□□□ 0.46
COL1A1-205ENST00000476387 ZNF318Q5VUA4 2279 aa17.89■□□□□ 0.46
COL1A1-205ENST00000476387 SYT1P21579 422 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 AFF1P51825 1210 aaKnown RBP17.89■□□□□ 0.45
COL1A1-205ENST00000476387 ZXDAP98168 799 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 PPP2R5AQ15172 486 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 PTPN14Q15678 1187 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 HFE2Q6ZVN8 426 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 BMP8AQ7Z5Y6 402 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 PPFIBP1Q86W92 1011 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 HACE1Q8IYU2 909 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 AUTS2Q8WXX7 1259 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 MFSD14AQ96MC6 490 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 APOL5Q9BWW9 433 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 NT5C3AQ9H0P0 336 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 C2orf40Q9H1Z8 148 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 FAN1Q9Y2M0 1017 aa17.89■□□□□ 0.45
COL1A1-205ENST00000476387 ARL5CA6NH57 179 aa17.88■□□□□ 0.45
COL1A1-205ENST00000476387 E9PMD0 336 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms