RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 RARS2Q5T160 578 aaKnown RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SMYD5Q6GMV2 418 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 KIAA1841Q6NSI8 718 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 AGMOQ6ZNB7 445 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SRGAP1Q7Z6B7 1085 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 NEK8Q86SG6 692 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 PPFIBP1Q86W92 1011 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 C4orf19Q8IY42 314 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 UBALD2Q8IYN6 164 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 C12orf76Q8N812 135 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 TMEM87AQ8NBN3 555 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 KREMEN2Q8NCW0 462 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 URGCPQ8TCY9 931 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SLC22A17Q8WUG5 538 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 PSPC1Q8WXF1 523 aaKnown RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SLC7A3Q8WY07 619 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 HAS1Q92839 578 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 CEP170P1Q96L14 293 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 NAP1L4Q99733 375 aaKnown RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 VN1R3Q9BXE9 311 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SLKQ9H2G2 1235 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 PDRG1Q9NUG6 133 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 WRAP73Q9P2S5 460 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-208ENST00000475795 DNAJB4Q9UDY4 337 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 STK39Q9UEW8 545 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 SORCS3Q9UPU3 1222 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 DOCK6Q96HP0 2047 aa8.05□□□□□ -1.12
UBE4B-208ENST00000475795 CNTNAP2Q9UHC6 1331 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 GAS2O43903 313 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 CCNT1O60563 726 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 BRD1O95696 1058 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 PDGFBP01127 241 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 WEE2P0C1S8 567 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 SRGAP2CP0DJJ0 459 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 XBP1P17861 261 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 HOXA11P31270 313 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 YWHABP31946 246 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 LAMTOR4Q0VGL1 99 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 EMC2Q15006 297 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 EPHA7Q15375 998 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 TSR1Q2NL82 804 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 ATAT1Q5SQI0 421 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 C6orf132Q5T0Z8 1188 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 UBXN11Q5T124 520 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 DMRTA1Q5VZB9 504 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 PIK3AP1Q6ZUJ8 805 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 MRPL10Q7Z7H8 261 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 FERMT3Q86UX7 667 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 CABP7Q86V35 215 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 ZNF280BQ86YH2 543 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 ZDHHC14Q8IZN3 488 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 TDRD5Q8NAT2 981 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 TCP11Q8WWU5 503 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 PRPF31Q8WWY3 499 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 TMEM143Q96AN5 459 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 FAM193BQ96PV7 902 aaPredicted RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 LXNQ9BS40 222 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 TMEM175Q9BSA9 504 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 GBP3Q9H0R5 595 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 MINDY3Q9H8M7 445 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 SFXN1Q9H9B4 322 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 RSAD1Q9HA92 442 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 KANSL3Q9P2N6 904 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 DBR1Q9UK59 544 aaKnown RBP8.04□□□□□ -1.12
UBE4B-208ENST00000475795 USTQ9Y2C2 406 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 TRIP11Q15643 1979 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 FAM186AA6NE01 2351 aa8.04□□□□□ -1.12
UBE4B-208ENST00000475795 PTPRZ1P23471 2315 aaPredicted RBP8.03□□□□□ -1.12
UBE4B-208ENST00000475795 ASAP2O43150 1006 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 PFKFB2O60825 505 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 LILRB3O75022 631 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 DDHD2O94830 711 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 POMCP01189 267 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 ASGR2P07307 311 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 NCLP19338 710 aaKnown RBP8.03□□□□□ -1.12
UBE4B-208ENST00000475795 CLCN4P51793 760 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 AFF1P51825 1210 aaKnown RBP8.03□□□□□ -1.12
UBE4B-208ENST00000475795 SPIRE1Q08AE8 756 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 PCBP1Q15365 356 aaKnown RBP eCLIP8.03□□□□□ -1.12
UBE4B-208ENST00000475795 EARS2Q5JPH6 523 aaKnown RBP8.03□□□□□ -1.12
UBE4B-208ENST00000475795 NCAPH2Q6IBW4 605 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 KANK3Q6NY19 840 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 TMC5Q6UXY8 1006 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 OTUD6AQ7L8S5 288 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 GPR149Q86SP6 731 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 SLFN12Q8IYM2 578 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 RNF149Q8NC42 400 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 SMG8Q8ND04 991 aaKnown RBP8.03□□□□□ -1.12
UBE4B-208ENST00000475795 CNNM3Q8NE01 707 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 FEZF2Q8TBJ5 459 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 DYDC2Q96IM9 177 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 KLHL5Q96PQ7 755 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 MTRQ99707 1265 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 EMILIN2Q9BXX0 1053 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 IRF2BPLQ9H1B7 796 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 SMOC2Q9H3U7 446 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 ZSWIM4Q9H7M6 989 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 UBN1Q9NPG3 1134 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 PLSCR2Q9NRY7 297 aa8.03□□□□□ -1.12
UBE4B-208ENST00000475795 GJB4Q9NTQ9 266 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms