RNA–Protein interactions for RNA: ENST00000475693.1

ATG4B-217, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 2,237 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-217ENST00000475693 MAPK6Q16659 721 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 ZBTB8OSQ8IWT0 167 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 FAM186BQ8IYM0 893 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 PLEKHO2Q8TD55 490 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 BORCS6Q96GS4 357 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 TMEM134Q9H6X4 195 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 EXOC7Q9UPT5 735 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 SMIM35A0A1B0GVV1 85 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 A0A1W2PQ45 241 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-217ENST00000475693 A0A1W2PQY0 241 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 CTSHP09668 335 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 SPAG1Q07617 926 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 TCERG1LQ5VWI1 586 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 EEF1DP3Q658K8 133 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 FAM114A1Q8IWE2 563 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 FAM213AQ9BRX8 229 aa19.75■□□□□ 0.75
ATG4B-217ENST00000475693 PAK6Q9NQU5 681 aaPredicted RBP19.75■□□□□ 0.75
ATG4B-217ENST00000475693 ASAP2O43150 1006 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 FGFR1OPO95684 399 aaKnown RBP19.74■□□□□ 0.75
ATG4B-217ENST00000475693 WNT7BP56706 349 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 VWA3BQ502W6 1294 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 TRIM59Q8IWR1 403 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 POP1Q99575 1024 aaKnown RBP19.74■□□□□ 0.75
ATG4B-217ENST00000475693 CRACR2AQ9BSW2 395 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 FZD8Q9H461 694 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 ARMCX3Q9UH62 379 aaPredicted RBP19.74■□□□□ 0.75
ATG4B-217ENST00000475693 PHLPP2Q6ZVD8 1323 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 AMHR2Q16671 573 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 FOXR2Q6PJQ5 311 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 CCDC186Q7Z3E2 898 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 ANKRD20A12PQ8NF67 263 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 CPLX3Q8WVH0 158 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 HVCN1Q96D96 273 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 ACO2Q99798 780 aaKnown RBP19.74■□□□□ 0.75
ATG4B-217ENST00000475693 TCHPQ9BT92 498 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 TRPV6Q9H1D0 765 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 KCNF1Q9H3M0 494 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 NDST4Q9H3R1 872 aa19.74■□□□□ 0.75
ATG4B-217ENST00000475693 EPB41P11171 864 aaKnown RBP19.73■□□□□ 0.75
ATG4B-217ENST00000475693 PSMC2P35998 433 aaKnown RBP19.73■□□□□ 0.75
ATG4B-217ENST00000475693 PHKA2P46019 1235 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 EFNA5P52803 228 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 OSTNP61366 133 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 PTGISQ16647 500 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 TMEM132AQ24JP5 1023 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 ARHGAP30Q7Z6I6 1101 aaPredicted RBP19.73■□□□□ 0.75
ATG4B-217ENST00000475693 CTU1Q7Z7A3 348 aaKnown RBP19.73■□□□□ 0.75
ATG4B-217ENST00000475693 VSTM4Q8IW00 320 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 CEP120Q8N960 986 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 XXYLT1Q8NBI6 393 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 PCDH10Q9P2E7 1040 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 FRMD4BQ9Y2L6 1034 aa19.73■□□□□ 0.75
ATG4B-217ENST00000475693 LGALS16A8MUM7 142 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 H0YCG3 227 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 RNF225M0QZC1 329 aaPredicted RBP19.72■□□□□ 0.75
ATG4B-217ENST00000475693 CBFA2T2O43439 604 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 TNFSF9P41273 254 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 PRPF4BQ13523 1007 aaKnown RBP19.72■□□□□ 0.75
ATG4B-217ENST00000475693 FILIP1LQ4L180 1135 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 GOLGA5Q8TBA6 731 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 CCDC127Q96BQ5 260 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 GLT1D1Q96MS3 346 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.72■□□□□ 0.75
ATG4B-217ENST00000475693 ACKR2O00590 384 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 GNAT1P11488 350 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 KCNH2Q12809 1159 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 NFIL3Q16649 462 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 MAN2A1Q16706 1144 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 SLC9A9Q8IVB4 645 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 MRPL4Q9BYD3 311 aaKnown RBP19.72■□□□□ 0.75
ATG4B-217ENST00000475693 C2orf40Q9H1Z8 148 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 KCNG1Q9UIX4 513 aa19.72■□□□□ 0.75
ATG4B-217ENST00000475693 LRRN2O75325 713 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 ARF4P18085 180 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 PBX1P40424 430 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 SNRNP35Q16560 246 aaKnown RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 CRELD2Q6UXH1 353 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 FRMD5Q7Z6J6 570 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 GPIHBP1Q8IV16 184 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 TMEM192Q8IY95 271 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 ZNF710Q8N1W2 664 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 SLC35C1Q96A29 364 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 ELMO3Q96BJ8 720 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 MSTO1Q9BUK6 570 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 STARD7Q9NQZ5 370 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 TOPORSQ9NS56 1045 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 AGO2Q9UKV8 859 aaKnown RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 LAMA2P24043 3122 aaKnown RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 KIAA0100Q14667 2235 aaKnown RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 ABLIM1O14639 778 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 MARSP56192 900 aaKnown RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 SYCP1Q15431 976 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 ATF7IP2Q5U623 682 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 LMBRD2Q68DH5 695 aaPredicted RBP19.71■□□□□ 0.75
ATG4B-217ENST00000475693 TMEM130Q8N3G9 435 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 ARRDC4Q8NCT1 418 aa19.71■□□□□ 0.75
ATG4B-217ENST00000475693 FRMPD3Q5JV73 1810 aa19.7■□□□□ 0.74
ATG4B-217ENST00000475693 A0A0B4J269 797 aa19.7■□□□□ 0.74
ATG4B-217ENST00000475693 CLDN3O15551 220 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms