RNA–Protein interactions for RNA: ENST00000475664.1

MCF2L2-209, Transcript of MCF.2 cell line derived transforming sequence-like 2, humanhuman

TSL 3

Gene MCF2L2, Length 460 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L2-209ENST00000475664 EEF1DP3Q658K8 133 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 TWF2Q6IBS0 349 aaKnown RBP24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 ACCSQ96QU6 501 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 PTPRHQ9HD43 1115 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 C1orf112Q9NSG2 853 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 GDAQ9Y2T3 454 aa24.33■■□□□ 1.49
MCF2L2-209ENST00000475664 ZMYM2Q9UBW7 1377 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 C9IYK1 514 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 PROZP22891 400 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 WDR5P61964 334 aaKnown RBP24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 SHHQ15465 462 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 TMEM132AQ24JP5 1023 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 ZNF658Q5TYW1 1059 aaPredicted RBP24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 LIN28BQ6ZN17 250 aaKnown RBP eCLIP24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 RBM43Q6ZSC3 357 aaKnown RBP24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 CDR2LQ86X02 465 aaPredicted RBP24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 BICD1Q96G01 975 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 IKZF4Q9H2S9 585 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 PRO3102Q9H379 93 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 CXXC1Q9P0U4 656 aaPredicted RBP24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 TMEM63CQ9P1W3 806 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 EXOC7Q9UPT5 735 aa24.32■■□□□ 1.48
MCF2L2-209ENST00000475664 ABLIM1O14639 778 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 HNRNPDLO14979 420 aaKnown RBP24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 LIG4P49917 911 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 MORC3Q14149 939 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 CCDC183Q5T5S1 534 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 SLC39A4Q6P5W5 647 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 SLC27A1Q6PCB7 646 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 SLC24A5Q71RS6 500 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 TMEM206Q9H813 350 aa24.31■■□□□ 1.48
MCF2L2-209ENST00000475664 A0A0U1RQF3 1178 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 ZBBXA8MT70 800 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 TOM1L1O75674 476 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 FAM189BP81408 668 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 DEFB103AP81534 67 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 SMYD4Q8IYR2 804 aaPredicted RBP24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 MYOCDQ8IZQ8 938 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 TRIML1Q8N9V2 468 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 EIF2AQ9BY44 585 aaKnown RBP24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 GTPBP4Q9BZE4 634 aaKnown RBP24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 MTIF3Q9H2K0 278 aaKnown RBP24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 FAM105AQ9NUU6 356 aa24.3■■□□□ 1.48
MCF2L2-209ENST00000475664 TISP43B9A030 160 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 ANKRD63C9JTQ0 380 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 BIN1O00499 593 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 BMP6P22004 513 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 KCNJ6P48051 423 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 RAB27AP51159 221 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 ZNF568Q3ZCX4 644 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 COBLL1Q53SF7 1204 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 ISM2Q6H9L7 571 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 MPZL3Q6UWV2 235 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 NELFCDQ8IXH7 590 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 SYCP3Q8IZU3 236 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 GUF1Q8N442 669 aaKnown RBP24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 ZBTB45Q96K62 511 aaPredicted RBP24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 RNPC3Q96LT9 517 aaKnown RBP24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 ADPGKQ9BRR6 497 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 CDT1Q9H211 546 aa24.29■■□□□ 1.48
MCF2L2-209ENST00000475664 ZNF623O75123 536 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 NPTXRO95502 500 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 AMHP03971 560 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 ATF7P17544 494 aaPredicted RBP24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 KNOP1Q1ED39 458 aaKnown RBP24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 DCAF4L1Q3SXM0 396 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 CAVIN1Q6NZI2 390 aaKnown RBP24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 CHRDL2Q6WN34 429 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 ECHDC2Q86YB7 292 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 CRIPAKQ8N1N5 446 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 HAPLN2Q9GZV7 340 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 ANKFY1Q9P2R3 1169 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 MAPK8IP1Q9UQF2 711 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 PCDHB2Q9Y5E7 798 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 STYXL1Q9Y6J8 313 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 SLC4A7Q9Y6M7 1214 aa24.28■■□□□ 1.48
MCF2L2-209ENST00000475664 TGFB1I1O43294 461 aa24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 SKIP12755 728 aa24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 MCL1Q07820 350 aa24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 SKOR2Q2VWA4 1001 aaPredicted RBP24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 MRPL10Q7Z7H8 261 aaKnown RBP24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 ZNF598Q86UK7 904 aaKnown RBP24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 SMG8Q8ND04 991 aaKnown RBP24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 SYAP1Q96A49 352 aaPredicted RBP24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 SLC9A7Q96T83 725 aa24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 TCHPQ9BT92 498 aa24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 GBP3Q9H0R5 595 aa24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 ELAC1Q9H777 363 aaKnown RBP24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 IPPQ9Y573 584 aa24.27■■□□□ 1.48
MCF2L2-209ENST00000475664 CLDN3O15551 220 aa24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 KIF20AO95235 890 aa24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 MCF2P10911 925 aa24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 PRCPP42785 496 aa24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 NOLC1Q14978 699 aaKnown RBP eCLIP24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 PRPF38BQ5VTL8 546 aaKnown RBP24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 APBB1IPQ7Z5R6 666 aaPredicted RBP24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 ZBTB33Q86T24 672 aa24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 NPAS4Q8IUM7 802 aa24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 TOP1MTQ969P6 601 aa24.26■■□□□ 1.47
MCF2L2-209ENST00000475664 TRIM6Q9C030 488 aaPredicted RBP24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms