RNA–Protein interactions for RNA: ENST00000475573.5

NME1-206, Transcript of NME/NM23 nucleoside diphosphate kinase 1, humanhuman

TSL 3

Gene NME1, Length 781 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME1-206ENST00000475573 EXOC6Q8TAG9 804 aa17.09■□□□□ 0.33
NME1-206ENST00000475573 NELL1Q92832 810 aa17.09■□□□□ 0.33
NME1-206ENST00000475573 NLRP4Q96MN2 994 aa17.09■□□□□ 0.33
NME1-206ENST00000475573 CEP89Q96ST8 783 aa17.09■□□□□ 0.33
NME1-206ENST00000475573 RIT2Q99578 217 aa17.09■□□□□ 0.33
NME1-206ENST00000475573 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.09■□□□□ 0.332e-9■■□□□ 12.5
NME1-206ENST00000475573 SUCLA2Q9P2R7 463 aaPredicted RBP17.09■□□□□ 0.33
NME1-206ENST00000475573 COL4A3Q01955 1670 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 SLC27A2O14975 620 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 ZBTB43O43298 467 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 TGM5O43548 720 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 CHMP2AO43633 222 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 TBC1D4O60343 1298 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 GAS7O60861 476 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 SPATA31D3P0C874 917 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 FSHRP23945 695 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 OR1G1P47890 313 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 XKR3Q5GH77 459 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 SPATA31D4Q6ZUB0 917 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 MTSS1LQ765P7 747 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 COLGALT2Q8IYK4 626 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 GPR65Q8IYL9 337 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 RDM1Q8NG50 284 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 FGF14Q92915 247 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 RPP25Q9BUL9 199 aaKnown RBP17.08■□□□□ 0.32
NME1-206ENST00000475573 ZMYND12Q9H0C1 365 aa17.08■□□□□ 0.32
NME1-206ENST00000475573 TDRD15B5MCY1 1934 aaKnown RBP17.08■□□□□ 0.32
NME1-206ENST00000475573 FAM170BA6NMN3 283 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 GAS2O43903 313 aaKnown RBP17.07■□□□□ 0.32
NME1-206ENST00000475573 TGM1P22735 817 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 PFKPQ01813 784 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 PFKFB3Q16875 520 aaPredicted RBP17.07■□□□□ 0.32
NME1-206ENST00000475573 PARM1Q6UWI2 310 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 PALB2Q86YC2 1186 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 ST13P5Q8NFI4 369 aaPredicted RBP17.07■□□□□ 0.32
NME1-206ENST00000475573 CCDC12Q8WUD4 166 aaPredicted RBP17.07■□□□□ 0.32
NME1-206ENST00000475573 JPH2Q9BR39 696 aaPredicted RBP17.07■□□□□ 0.32
NME1-206ENST00000475573 TEKT3Q9BXF9 490 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 UNC45AQ9H3U1 944 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 IFT122Q9HBG6 1241 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 C6orf50Q9HD87 102 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 LTB4R2Q9NPC1 389 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 UBN1Q9NPG3 1134 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 CHST7Q9NS84 486 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 FNIP2Q9P278 1114 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 GMEB2Q9UKD1 530 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 CDH7Q9ULB5 785 aa17.07■□□□□ 0.32
NME1-206ENST00000475573 MSH4O15457 936 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 MAFO75444 373 aaPredicted RBP17.06■□□□□ 0.32
NME1-206ENST00000475573 ZMYND10O75800 440 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 NCLP19338 710 aaKnown RBP17.06■□□□□ 0.32
NME1-206ENST00000475573 CREMQ03060 361 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 DSC1Q08554 894 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 SLC44A4Q53GD3 710 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 LRCH2Q5VUJ6 765 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 LILRA6Q6PI73 481 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 KSR1Q8IVT5 923 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 CNNM3Q8NE01 707 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 SLC5A5Q92911 643 aa17.06■□□□□ 0.32
NME1-206ENST00000475573 FAM126AQ9BYI3 521 aaPredicted RBP17.06■□□□□ 0.32
NME1-206ENST00000475573 PRMT8Q9NR22 394 aaPredicted RBP17.06■□□□□ 0.32
NME1-206ENST00000475573 MTF2Q9Y483 593 aaPredicted RBP17.06■□□□□ 0.32
NME1-206ENST00000475573 BAHCC1Q9P281 2608 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 TMEM150BA6NC51 233 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 GOLGA8AA7E2F4 631 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 GOLGA8BA8MQT2 603 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 ADAMTS3O15072 1205 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 NR1I2O75469 434 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 STBD1O95210 358 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 GNA11P29992 359 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 ZBTB41Q5SVQ8 909 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 UBXN11Q5T124 520 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 CREB3L3Q68CJ9 461 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 CLDN23Q96B33 292 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 MBOAT7Q96N66 472 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 LSG1Q9H089 658 aaKnown RBP17.05■□□□□ 0.32
NME1-206ENST00000475573 PARD6AQ9NPB6 346 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 BRPF3Q9ULD4 1205 aa17.05■□□□□ 0.32
NME1-206ENST00000475573 FAM208BQ5VWN6 2430 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 NCAM2O15394 837 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 HOXA11P31270 313 aaPredicted RBP17.04■□□□□ 0.32
NME1-206ENST00000475573 RPS9P46781 194 aaKnown RBP17.04■□□□□ 0.32
NME1-206ENST00000475573 RCAN1P53805 252 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 USP41Q3LFD5 358 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 MIER3Q7Z3K6 550 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 SRGAP1Q7Z6B7 1085 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 GRASPQ7Z6J2 395 aaPredicted RBP17.04■□□□□ 0.32
NME1-206ENST00000475573 NETO1Q8TDF5 533 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 CHAMP1Q96JM3 812 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 NELL2Q99435 816 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 SH2D3AQ9BRG2 576 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 COLEC11Q9BWP8 271 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 FAM217BQ9NTX9 383 aaPredicted RBP17.04■□□□□ 0.32
NME1-206ENST00000475573 COL4A3BPQ9Y5P4 624 aa17.04■□□□□ 0.32
NME1-206ENST00000475573 ARL5CA6NH57 179 aa17.03■□□□□ 0.32
NME1-206ENST00000475573 SLC30A4O14863 429 aa17.03■□□□□ 0.32
NME1-206ENST00000475573 HNRNPA1P09651 372 aaKnown RBP eCLIP17.03■□□□□ 0.32
NME1-206ENST00000475573 ITGA4P13612 1032 aa17.03■□□□□ 0.32
NME1-206ENST00000475573 TARSP26639 723 aaKnown RBP17.03■□□□□ 0.32
NME1-206ENST00000475573 CDC27P30260 824 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms