RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ABI1Q8IZP0 508 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 IQUBQ8NA54 791 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 CNNM3Q8NE01 707 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 RASSF8Q8NHQ8 419 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 HELQQ8TDG4 1101 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 MRPL9Q9BYD2 267 aaKnown RBP17.27■□□□□ 0.36
CPSF3-203ENST00000475482 CCSER1Q9C0I3 900 aa17.27■□□□□ 0.36
CPSF3-203ENST00000475482 A0A087WWV3 80 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 MEIS3P2A8K0S8 358 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 H3BQ06 376 aaPredicted RBP17.26■□□□□ 0.35
CPSF3-203ENST00000475482 POLR2DO15514 142 aaKnown RBP17.26■□□□□ 0.35
CPSF3-203ENST00000475482 GLRA2P23416 452 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 ERVFC1P60507 584 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 ZRSR1Q15695 479 aaKnown RBP17.26■□□□□ 0.35
CPSF3-203ENST00000475482 CAMK4Q16566 473 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 SPECC1Q5M775 1068 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 PTCRAQ6ISU1 281 aaPredicted RBP17.26■□□□□ 0.35
CPSF3-203ENST00000475482 PDE12Q6L8Q7 609 aaKnown RBP17.26■□□□□ 0.35
CPSF3-203ENST00000475482 FAM178BQ8IXR5 827 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 EFHBQ8N7U6 833 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 IGSF22Q8N9C0 903 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 ASAP3Q8TDY4 903 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 NACC1Q96RE7 527 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 TLR9Q9NR96 1032 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 CLDND1Q9NY35 253 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 PCDHB2Q9Y5E7 798 aa17.26■□□□□ 0.35
CPSF3-203ENST00000475482 TBX10O75333 385 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 OFD1O75665 1012 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 CCDC192P0DO97 292 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 IL9P15248 144 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 PPM1AP35813 382 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 CAPSQ13938 189 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 IL17AQ16552 155 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 AMHR2Q16671 573 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 SASS6Q6UVJ0 657 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 AGMOQ6ZNB7 445 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 KRBA2Q6ZNG9 492 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 RBM43Q6ZSC3 357 aaKnown RBP17.25■□□□□ 0.35
CPSF3-203ENST00000475482 THNSL1Q8IYQ7 743 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 SLC39A11Q8N1S5 342 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 RNF169Q8NCN4 708 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 ERMNQ8TAM6 284 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 LPPQ93052 612 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 PPP2R3CQ969Q6 453 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 CALML4Q96GE6 196 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 EPSTI1Q96J88 318 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 ZNF558Q96NG5 402 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 CUEDC2Q9H467 287 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 LRWD1Q9UFC0 647 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 PCDHGC5Q9Y5F6 944 aa17.25■□□□□ 0.35
CPSF3-203ENST00000475482 LINC01565O15544 149 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 TSPAN1O60635 241 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 AXLP30530 894 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 MBTD1Q05BQ5 628 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 KCNC3Q14003 757 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 TFDP1Q14186 410 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 ECM1Q16610 540 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 KRT79Q5XKE5 535 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 PIAS4Q8N2W9 510 aaPredicted RBP17.24■□□□□ 0.35
CPSF3-203ENST00000475482 MSLNLQ96KJ4 702 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 TSPY26PQ9H489 355 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 MAGEF1Q9HAY2 307 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 CD320Q9NPF0 282 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 TBC1D13Q9NVG8 400 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 SPG21Q9NZD8 308 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 CLEC1BQ9P126 229 aa17.24■□□□□ 0.35
CPSF3-203ENST00000475482 C5orf42Q9H799 3197 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 CARNS1A5YM72 827 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 GOLGA6L3A6NEY3 463 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 INPPL1O15357 1258 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 EYA4O95677 639 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 GLP2RO95838 553 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 SLFN14P0C7P3 912 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 PBX3P40426 434 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 LONRF3Q496Y0 759 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 RRAGBQ5VZM2 374 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 HAUS3Q68CZ6 603 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 POTEGQ6S5H5 508 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 GLB1LQ6UWU2 654 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 CABP7Q86V35 215 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 PDILTQ8N807 584 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 MCPH1Q8NEM0 835 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 PGBD4Q96DM1 585 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 CCDC51Q96ER9 411 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 NRDE2Q9H7Z3 1164 aa17.23■□□□□ 0.35
CPSF3-203ENST00000475482 PUF60Q9UHX1 559 aaKnown RBP17.23■□□□□ 0.35
CPSF3-203ENST00000475482 CNTNAP2Q9UHC6 1331 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 USO1O60763 962 aaKnown RBP17.22■□□□□ 0.35
CPSF3-203ENST00000475482 CSPG5O95196 566 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 CAVIN2O95810 425 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 CYP11B2P19099 503 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 STAT6P42226 847 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 NRIP1P48552 1158 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 BCAR1P56945 870 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 COASYQ13057 564 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 DUSP6Q16828 381 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 NOMO2Q5JPE7 1267 aa17.22■□□□□ 0.35
CPSF3-203ENST00000475482 CDCA2Q69YH5 1023 aaPredicted RBP17.22■□□□□ 0.35
CPSF3-203ENST00000475482 TMEM184AQ6ZMB5 413 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms