RNA–Protein interactions for RNA: ENST00000475470.1

RPUSD3-215, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,413 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-215ENST00000475470 TARBP2Q15633 366 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 NFRKBQ6P4R8 1299 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 H2AFVQ71UI9 128 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 POP1Q99575 1024 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 FAM213AQ9BRX8 229 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 TMEM8AQ9HCN3 771 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 NENFQ9UMX5 172 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 PCDHGC5Q9Y5F6 944 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 K7ERI5 159 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 NOP2P46087 812 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 IFI16Q16666 785 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 CELF3Q5SZQ8 465 aaKnown RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 MAP1SQ66K74 1059 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 DNAAF5Q86Y56 855 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 CREG2Q8IUH2 290 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 GLYCTKQ8IVS8 523 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 FBXO16Q8IX29 292 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 SHCBP1Q8NEM2 672 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 SLC30A5Q8TAD4 765 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 LNX1Q8TBB1 728 aaPredicted RBP16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 FAM167AQ96KS9 214 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 PSMB7Q99436 277 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 TLR10Q9BXR5 811 aa16.65■□□□□ 0.26
RPUSD3-215ENST00000475470 TNFAIP3P21580 790 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 CXCR5P32302 372 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 KIF22Q14807 665 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 BRD3Q15059 726 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 DHX37Q8IY37 1157 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 COG1Q8WTW3 980 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 GTF3C2Q8WUA4 911 aaPredicted RBP16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 GPR20Q99678 358 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 EFCC1Q9HA90 598 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 OGFRQ9NZT2 677 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 INTUQ9ULD6 942 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 ATP8B3O60423 1300 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 ZNF233A6NK53 670 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 DLATP10515 647 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 GTF2H1P32780 548 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 HSDL1Q3SXM5 330 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 CC2D1AQ6P1N0 951 aaPredicted RBP16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 GPRC5AQ8NFJ5 357 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 KIAA1586Q9HCI6 787 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 ARFGAP3Q9NP61 516 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 SEPT11Q9NVA2 429 aaKnown RBP16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 USP20Q9Y2K6 914 aa16.64■□□□□ 0.25
RPUSD3-215ENST00000475470 CCDC151A5D8V7 595 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 UNCXA6NJT0 531 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 PDE2AO00408 941 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 FTCDO95954 541 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 POTEJP0CG39 1038 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 MARK3P27448 753 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 CCDC181Q5TID7 509 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 BBXQ8WY36 941 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 SPATA33Q96N06 139 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 PNKPQ96T60 521 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 TOPORSQ9NS56 1045 aaPredicted RBP16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 RAB21Q9UL25 225 aa16.63■□□□□ 0.25
RPUSD3-215ENST00000475470 GRID2IPA4D2P6 1211 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 ASB14A6NK59 587 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 PDHXO00330 501 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 EXTL3O43909 919 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 GRIN3BO60391 1043 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 MAFO75444 373 aaPredicted RBP16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 SEC31AO94979 1220 aaKnown RBP16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 CETPP11597 493 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 USP8P40818 1118 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 MFAP3P55082 362 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 CCNA1P78396 465 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 PPM1KQ8N3J5 372 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 FBXL13Q8NEE6 735 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 SEMA4DQ92854 862 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 KCNN1Q92952 543 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 COQ4Q9Y3A0 265 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 PPME1Q9Y570 386 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 ZNFX1Q9P2E3 1918 aaKnown RBP16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 TMCO5BA8MYB1 307 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 ZRANB2O95218 330 aaKnown RBP eCLIP16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 TUBBP07437 444 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 TXNP10599 105 aaKnown RBP16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 PAFAH1B1P43034 410 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 ENPEPQ07075 957 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 MKRN3Q13064 507 aaKnown RBP16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 MEI1Q5TIA1 1274 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 SLFN12LQ6IEE8 588 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 MORC4Q8TE76 937 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 SYT11Q9BT88 431 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 RAB20Q9NX57 234 aa16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 AGO2Q9UKV8 859 aaKnown RBP16.62■□□□□ 0.25
RPUSD3-215ENST00000475470 LOC102724159A0A0B4J2E5 919 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 KIAA0391O15091 583 aaKnown RBP16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 LGR5O75473 907 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 MATR3P43243 847 aaKnown RBP eCLIP16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 GPC3P51654 580 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 GALCP54803 685 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 TTLL4Q14679 1199 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 PWP2Q15269 919 aaKnown RBP16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 CCDC62Q6P9F0 684 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 SV2AQ7L0J3 742 aa16.61■□□□□ 0.25
RPUSD3-215ENST00000475470 PLPPR4Q7Z2D5 763 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms