RNA–Protein interactions for RNA: ENST00000475329.5

TRAF4-210, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-210ENST00000475329 MARCH8Q5T0T0 291 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 USP37Q86T82 979 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 CBWD2Q8IUF1 395 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 ZSWIM2Q8NEG5 633 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 OR8K1Q8NGG5 319 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 CRACR2AQ9BSW2 395 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 TARS2Q9BW92 718 aaKnown RBP14.96□□□□□ -0.01
TRAF4-210ENST00000475329 SETD4Q9NVD3 440 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 CEP72Q9P209 647 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 ANKFY1Q9P2R3 1169 aa14.96□□□□□ -0.01
TRAF4-210ENST00000475329 AGO2Q9UKV8 859 aaKnown RBP14.96□□□□□ -0.01
TRAF4-210ENST00000475329 MYADML2A6NDP7 307 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 INO80B-WBP1J3KQ70 363 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 ZEB2O60315 1214 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 MSCO60682 206 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 LDHAP00338 332 aaKnown RBP14.95□□□□□ -0.02
TRAF4-210ENST00000475329 EDN1P05305 212 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 NKX3-2P78367 333 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 MBTD1Q05BQ5 628 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 CYP24A1Q07973 514 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 NFRKBQ6P4R8 1299 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 CACNA2D4Q7Z3S7 1137 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 IFNLR1Q8IU57 520 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-210ENST00000475329 C17orf53Q8N3J3 647 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-210ENST00000475329 RAET1EQ8TD07 263 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 TMC2Q8TDI7 906 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 MFSD14AQ96MC6 490 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 MTG1Q9BT17 334 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-210ENST00000475329 MSTO1Q9BUK6 570 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 INO80BQ9C086 356 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-210ENST00000475329 PLCB1Q9NQ66 1216 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 RRAGDQ9NQL2 400 aaPredicted RBP14.95□□□□□ -0.02
TRAF4-210ENST00000475329 AGPAT5Q9NUQ2 364 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 ZNHIT6Q9NWK9 470 aaKnown RBP14.95□□□□□ -0.02
TRAF4-210ENST00000475329 GCNT4Q9P109 453 aa14.95□□□□□ -0.02
TRAF4-210ENST00000475329 MBLAC1A4D2B0 266 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 ZNF233A6NK53 670 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 ACKR2O00590 384 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 EPHB6O15197 1021 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 P4HA2O15460 535 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 TOM1L1O75674 476 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 VTNP04004 478 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 HSPA1AP0DMV8 641 aaKnown RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 HSPA1BP0DMV9 641 aaKnown RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 CCND3P30281 292 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 MCCD1P59942 119 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 PRPF4BQ13523 1007 aaKnown RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 FAM187BQ17R55 369 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 GNASQ5JWF2 1037 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 CYP26C1Q6V0L0 522 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 ZNF410Q86VK4 478 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 TMTC1Q8IUR5 882 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 KIAA0319LQ8IZA0 1049 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 ZNF668Q96K58 619 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 SCLT1Q96NL6 688 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 ACO2Q99798 780 aaKnown RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 FAM213AQ9BRX8 229 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 GANQ9H2C0 597 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 FZD8Q9H461 694 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 XPNPEP3Q9NQH7 507 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 SPTLC3Q9NUV7 552 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 PRMT7Q9NVM4 692 aaPredicted RBP14.94□□□□□ -0.02
TRAF4-210ENST00000475329 RALGAPA2Q2PPJ7 1873 aa14.94□□□□□ -0.02
TRAF4-210ENST00000475329 A0A087WZ62 844 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 A0A0B4J269 797 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 SMIM35A0A1B0GVV1 85 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CLDN3O15551 220 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CCP110O43303 1012 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 NOL4O94818 638 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 PGK1P00558 417 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 GNAT1P11488 350 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CYP2C9P11712 490 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 PON1P27169 355 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 GPC3P51654 580 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 PRMT2P55345 433 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 DLG4P78352 724 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CDC42EP1Q00587 391 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CETN1Q12798 172 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 NOLC1Q14978 699 aaKnown RBP eCLIP14.93□□□□□ -0.02
TRAF4-210ENST00000475329 TMEM132AQ24JP5 1023 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CBWD6Q4V339 395 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CBWD3Q5JTY5 395 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CBWD5Q5RIA9 395 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 PDXDC1Q6P996 788 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 TSHZ1Q6ZSZ6 1077 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 C7orf31Q8N865 590 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 PLEKHO2Q8TD55 490 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 PXYLP1Q8TE99 480 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 NLRP7Q8WX94 980 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 ZBTB45Q96K62 511 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-210ENST00000475329 FDXACB1Q9BRP7 624 aaPredicted RBP14.93□□□□□ -0.02
TRAF4-210ENST00000475329 HAPLN2Q9GZV7 340 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 NUCKS1Q9H1E3 243 aaKnown RBP14.93□□□□□ -0.02
TRAF4-210ENST00000475329 IFT122Q9HBG6 1241 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 KCND1Q9NSA2 647 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 USP20Q9Y2K6 914 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 DAAM1Q9Y4D1 1078 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CITO14578 2027 aa14.93□□□□□ -0.02
TRAF4-210ENST00000475329 CNTNAP2Q9UHC6 1331 aa14.92□□□□□ -0.02
TRAF4-210ENST00000475329 C17orf102A2RUQ5 167 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms