RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 QARSP47897 775 aaKnown RBP14.08□□□□□ -0.16
SKA3-206ENST00000475251 CREMQ03060 361 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 PUM1Q14671 1186 aaKnown RBP eCLIP14.08□□□□□ -0.16
SKA3-206ENST00000475251 BLOC1S2Q6QNY1 142 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 GPR65Q8IYL9 337 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 HACE1Q8IYU2 909 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 FAM177A1Q8N128 213 aaPredicted RBP14.08□□□□□ -0.16
SKA3-206ENST00000475251 FEZF2Q8TBJ5 459 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 RSAD2Q8WXG1 361 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 RUBCNQ92622 972 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 GJA10Q969M2 543 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 RMDN1Q96DB5 314 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 CCDC51Q96ER9 411 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 SHDQ96IW2 340 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 CEP170P1Q96L14 293 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 ARHGEF3Q9NR81 526 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 PCDHA4Q9UN74 947 aa14.08□□□□□ -0.16
SKA3-206ENST00000475251 DCHS1Q96JQ0 3298 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 EDIL3O43854 480 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 TDP2O95551 362 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 SRGAP2CP0DJJ0 459 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 LAMP2P13473 410 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 DSG1Q02413 1049 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 NTRK3Q16288 839 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 SPECC1Q5M775 1068 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 KIAA0319Q5VV43 1072 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 PLA2G4FQ68DD2 849 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 GALNT17Q6IS24 598 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 NOTUMQ6P988 496 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 C1orf210Q8IVY1 113 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 COLGALT2Q8IYK4 626 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 KIAA2013Q8IYS2 634 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 RNF168Q8IYW5 571 aaPredicted RBP14.07□□□□□ -0.16
SKA3-206ENST00000475251 ETNPPLQ8TBG4 499 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 GPR152Q8TDT2 470 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 PRPF31Q8WWY3 499 aaKnown RBP14.07□□□□□ -0.16
SKA3-206ENST00000475251 JAKMIP1Q96N16 626 aaKnown RBP14.07□□□□□ -0.16
SKA3-206ENST00000475251 COLEC11Q9BWP8 271 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 SLC2A4RGQ9NR83 387 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 MARCH5Q9NX47 278 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 DDX25Q9UHL0 483 aaKnown RBP14.07□□□□□ -0.16
SKA3-206ENST00000475251 R4GN57 208 aa14.07□□□□□ -0.16
SKA3-206ENST00000475251 RFPL2O75678 378 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 P4HBP07237 508 aaKnown RBP14.06□□□□□ -0.16
SKA3-206ENST00000475251 HOXA11P31270 313 aaPredicted RBP14.06□□□□□ -0.16
SKA3-206ENST00000475251 AFF1P51825 1210 aaKnown RBP14.06□□□□□ -0.16
SKA3-206ENST00000475251 DSC1Q08554 894 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 LAMTOR4Q0VGL1 99 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 PPP2R5CQ13362 524 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 UBXN11Q5T124 520 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 DCLRE1AQ6PJP8 1040 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 GET4Q7L5D6 327 aaPredicted RBP14.06□□□□□ -0.16
SKA3-206ENST00000475251 OTUD6AQ7L8S5 288 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 RIN2Q8WYP3 895 aaPredicted RBP14.06□□□□□ -0.16
SKA3-206ENST00000475251 MBOAT7Q96N66 472 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 MYADMQ96S97 322 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 AGXT2Q9BYV1 514 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 PRKD2Q9BZL6 878 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 NT5C3AQ9H0P0 336 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 SLKQ9H2G2 1235 aaPredicted RBP14.06□□□□□ -0.16
SKA3-206ENST00000475251 DHX33Q9H6R0 707 aaKnown RBP14.06□□□□□ -0.16
SKA3-206ENST00000475251 FNIP2Q9P278 1114 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 IPPQ9Y573 584 aa14.06□□□□□ -0.16
SKA3-206ENST00000475251 GVINP1Q7Z2Y8 2422 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 ARL5CA6NH57 179 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 ANHXE9PGG2 379 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 CDC45O75419 566 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 EFEMP2O95967 443 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 DCNP07585 359 aaKnown RBP14.05□□□□□ -0.16
SKA3-206ENST00000475251 SP9P0CG40 484 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 PSMA5P28066 241 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 MLH1P40692 756 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 SSRP1Q08945 709 aaKnown RBP14.05□□□□□ -0.16
SKA3-206ENST00000475251 MXD4Q14582 209 aaPredicted RBP14.05□□□□□ -0.16
SKA3-206ENST00000475251 USP41Q3LFD5 358 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 KRT25Q7Z3Z0 450 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 BLIDQ8IZY5 108 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 RNF149Q8NC42 400 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 SMG8Q8ND04 991 aaKnown RBP14.05□□□□□ -0.16
SKA3-206ENST00000475251 TMEM143Q96AN5 459 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 ZNF707Q96C28 371 aaPredicted RBP14.05□□□□□ -0.16
SKA3-206ENST00000475251 FAM20AQ96MK3 541 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 GAD1Q99259 594 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 TRIM6Q9C030 488 aaPredicted RBP14.05□□□□□ -0.16
SKA3-206ENST00000475251 MINDY3Q9H8M7 445 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 CHST7Q9NS84 486 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 GIT1Q9Y2X7 761 aa14.05□□□□□ -0.16
SKA3-206ENST00000475251 TGM5O43548 720 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 KINO60870 393 aaKnown RBP14.04□□□□□ -0.16
SKA3-206ENST00000475251 DEXIO95424 95 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 CPA1P15085 419 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 CD44P16070 742 aaKnown RBP14.04□□□□□ -0.16
SKA3-206ENST00000475251 SDHBP21912 280 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 RPS6KB1P23443 525 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 YWHABP31946 246 aaKnown RBP14.04□□□□□ -0.16
SKA3-206ENST00000475251 NPEPPSP55786 919 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 STARD6P59095 220 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 HTR4Q13639 388 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 TFDP1Q14186 410 aa14.04□□□□□ -0.16
SKA3-206ENST00000475251 EMC2Q15006 297 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms