RNA–Protein interactions for RNA: ENST00000474721.1

PIKFYVE-208, Transcript of phosphoinositide kinase, FYVE-type zinc finger containing, humanhuman

TSL 4

Gene PIKFYVE, Length 538 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PIKFYVE-208ENST00000474721 SF3A1Q15459 793 aaKnown RBP4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 XYLT1Q86Y38 959 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 KIF18BQ86Y91 864 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 PLXDC1Q8IUK5 500 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 ARHGEF19Q8IW93 802 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 CMTR2Q8IYT2 770 aaKnown RBP4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 LILRA3Q8N6C8 439 aaPredicted RBP4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 EFHBQ8N7U6 833 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 GAB3Q8WWW8 586 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 BBC3Q96PG8 261 aaPredicted RBP4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 LSM14BQ9BX40 385 aaKnown RBP4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 OSBPL2Q9H1P3 480 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 ZMAT4Q9H898 229 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 SYNPO2LQ9H987 977 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 INTS7Q9NVH2 962 aaKnown RBP4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 H2AFY2Q9P0M6 372 aaPredicted RBP4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 MSRAQ9UJ68 235 aa4.85□□□□□ -1.63
PIKFYVE-208ENST00000474721 ELL2O00472 640 aaPredicted RBP4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 SPATA31D3P0C874 917 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 MGAT1P26572 445 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 NEK4P51957 841 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 PTTG1IPP53801 180 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 ATXN1P54253 815 aaKnown RBP4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 RNASE9P60153 205 aaKnown RBP4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 MXRA7P84157 204 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 GUCY1B3Q02153 619 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 NHLH2Q02577 135 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 HNRNPA0Q13151 305 aaKnown RBP4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 DDB1Q16531 1140 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 CCDC178Q5BJE1 867 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 ZKSCAN2Q63HK3 967 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 CREB3L3Q68CJ9 461 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 CCDC62Q6P9F0 684 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 SPATA31D4Q6ZUB0 917 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 WDR26Q9H7D7 661 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 POGKQ9P215 609 aa4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 CDK11AQ9UQ88 783 aaPredicted RBP4.84□□□□□ -1.63
PIKFYVE-208ENST00000474721 PPP1R12AO14974 1030 aaPredicted RBP4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 RFPL3O75679 317 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 F2P00734 622 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 CLEC2LP0C7M8 214 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 HKR1P10072 659 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 BMPR1AP36894 532 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 APBA1Q02410 837 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 MGAT5Q09328 741 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 PABPC4Q13310 644 aaKnown RBP eCLIP4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 EFCAB12Q6NXP0 572 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 RD3Q7Z3Z2 195 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 NELL1Q92832 810 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 MRFAP1L1Q96HT8 127 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 COQ10AQ96MF6 247 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 CDC5LQ99459 802 aaKnown RBP4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 ORAI3Q9BRQ5 295 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 THG1LQ9NWX6 298 aaKnown RBP4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 KCNG1Q9UIX4 513 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 INSL6Q9Y581 213 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 COX11Q9Y6N1 276 aa4.83□□□□□ -1.64
PIKFYVE-208ENST00000474721 LEFTY2O00292 366 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 KPNA6O60684 536 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 SEC24DO94855 1032 aaPredicted RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 ASMTLO95671 621 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 PFKMP08237 780 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 RBP3P10745 1247 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 KPNA1P52294 538 aaPredicted RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 BLOC1S1P78537 153 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 SQSTM1Q13501 440 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 SART3Q15020 963 aaKnown RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 UBE3CQ15386 1083 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 BEAN1Q3B7T3 259 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 DRICH1Q6PGQ1 229 aaPredicted RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 GPRIN1Q7Z2K8 1008 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 GLB1L2Q8IW92 636 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 NXPE1Q8N323 547 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 MSL3Q8N5Y2 521 aaKnown RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 CPEB3Q8NE35 698 aaKnown RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 OR10H5Q8NGA6 315 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 NTN5Q8WTR8 489 aaPredicted RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 CHTF18Q8WVB6 975 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 ZNF496Q96IT1 587 aaPredicted RBP4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 RSAD1Q9HA92 442 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 CHST2Q9Y4C5 530 aa4.82□□□□□ -1.64
PIKFYVE-208ENST00000474721 SPATA31A6Q5VVP1 1343 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 A0A1W2PR48 441 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 B5MCH6 92 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 LTA4HP09960 611 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 CDK4P11802 303 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 ZSCAN20P17040 1043 aaPredicted RBP4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 DDX6P26196 483 aaKnown RBP eCLIP4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 LSP1P33241 339 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 OCRLQ01968 901 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 BMS1Q14692 1282 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 ZBTB41Q5SVQ8 909 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 GPR158Q5T848 1215 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 SYNPOQ8N3V7 929 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 SH3TC2Q8TF17 1288 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 RSAD2Q8WXG1 361 aa4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 DNAJC2Q99543 621 aaKnown RBP4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 FDXACB1Q9BRP7 624 aaPredicted RBP4.81□□□□□ -1.64
PIKFYVE-208ENST00000474721 SYBUQ9NX95 663 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms