RNA–Protein interactions for RNA: ENST00000474684.1

CPSF7-210, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 635 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-210ENST00000474684 PUS10Q3MIT2 529 aaKnown RBP6.61□□□□□ -1.35
CPSF7-210ENST00000474684 XKR9Q5GH70 373 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 KANK3Q6NY19 840 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 AGMOQ6ZNB7 445 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 FERMT3Q86UX7 667 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 CDR2LQ86X02 465 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-210ENST00000474684 ZNF280BQ86YH2 543 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 RNF135Q8IUD6 432 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 CCDC83Q8IWF9 413 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 C4orf19Q8IY42 314 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 SMG8Q8ND04 991 aaKnown RBP6.61□□□□□ -1.35
CPSF7-210ENST00000474684 MICAL1Q8TDZ2 1067 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 PRPF31Q8WWY3 499 aaKnown RBP6.61□□□□□ -1.35
CPSF7-210ENST00000474684 SUSD6Q92537 303 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 ZNF516Q92618 1163 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 CPB2Q96IY4 423 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 FAM20AQ96MK3 541 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 KIF2CQ99661 725 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 EIF2AK1Q9BQI3 630 aaKnown RBP6.61□□□□□ -1.35
CPSF7-210ENST00000474684 EIF2AQ9BY44 585 aaKnown RBP6.61□□□□□ -1.35
CPSF7-210ENST00000474684 GBP3Q9H0R5 595 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 ZBP1Q9H171 429 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 NRDE2Q9H7Z3 1164 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 GPRC5CQ9NQ84 441 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 AAASQ9NRG9 546 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 MARCH5Q9NX47 278 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 CACNG4Q9UBN1 327 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 PRKAG3Q9UGI9 489 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 HCFC2Q9Y5Z7 792 aa6.61□□□□□ -1.35
CPSF7-210ENST00000474684 KIF26AQ9ULI4 1882 aaPredicted RBP6.61□□□□□ -1.35
CPSF7-210ENST00000474684 COL4A2P08572 1712 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 SPTBN4Q9H254 2564 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 C2orf71A6NGG8 1288 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 PRR33A8MZF0 331 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 LOC730098B7Z3J9 87 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 NCK2O43639 380 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 NEMFO60524 1076 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 USO1O60763 962 aaKnown RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 CLASP2O75122 1294 aaKnown RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 MED24O75448 989 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 OFD1O75665 1012 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 DDHD2O94830 711 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 SLITRK3O94933 977 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 P4HBP07237 508 aaKnown RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 SRGAP2CP0DJJ0 459 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 EPCAMP16422 314 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 XBP1P17861 261 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 ATP2B1P20020 1258 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 CA8P35219 290 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 PPM1AP35813 382 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 MLH1P40692 756 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 RFC5P40937 340 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 TECP42680 631 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 RARRES1P49788 294 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 MBTD1Q05BQ5 628 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 CBX2Q14781 532 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 ANKRD1Q15327 319 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 AMHR2Q16671 573 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 CSPP1Q1MSJ5 1256 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 C8orf34Q49A92 452 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 ANKRD54Q6NXT1 300 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 HFE2Q6ZVN8 426 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 TPH2Q8IWU9 490 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 RNF149Q8NC42 400 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 PIGOQ8TEQ8 1089 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 PSPC1Q8WXF1 523 aaKnown RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 SLC7A3Q8WY07 619 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 BSNDQ8WZ55 320 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 PPP2R3CQ969Q6 453 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 RPGRIP1Q96KN7 1286 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 ZFP42Q96MM3 310 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 MTMR9Q96QG7 549 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 TRAIPQ9BWF2 469 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 MRPL9Q9BYD2 267 aaKnown RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 S1PR5Q9H228 398 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 SMOC2Q9H3U7 446 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 NXF3Q9H4D5 531 aaKnown RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 POMKQ9H5K3 350 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 TTC12Q9H892 705 aaPredicted RBP6.6□□□□□ -1.35
CPSF7-210ENST00000474684 DACT1Q9NYF0 836 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 SPG21Q9NZD8 308 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 FAM50BQ9Y247 325 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 LZTS1Q9Y250 596 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 HES2Q9Y543 173 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 PCDHB2Q9Y5E7 798 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 VPS13AQ96RL7 3174 aa6.6□□□□□ -1.35
CPSF7-210ENST00000474684 PTPRZ1P23471 2315 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-210ENST00000474684 TICRRQ7Z2Z1 1910 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 INO80B-WBP1J3KQ70 363 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 ZNF623O75123 536 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 LYPLA2O95372 231 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 CD2BP2O95400 341 aaKnown RBP6.59□□□□□ -1.35
CPSF7-210ENST00000474684 EOMESO95936 686 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 PDGFBP01127 241 aaPredicted RBP6.59□□□□□ -1.35
CPSF7-210ENST00000474684 POMCP01189 267 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 SSBP05455 408 aaKnown RBP eCLIP6.59□□□□□ -1.35
CPSF7-210ENST00000474684 GALTP07902 379 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 SPATA31C1P0DKV0 1188 aa6.59□□□□□ -1.35
CPSF7-210ENST00000474684 ARF4P18085 180 aaPredicted RBP6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms