RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 FBXL13Q8NEE6 735 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 OSBPL9Q96SU4 736 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 SYT11Q9BT88 431 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 GPR88Q9GZN0 384 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 TXNRD2Q9NNW7 524 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 SIP14410 1827 aa23.57■■□□□ 1.36
CCM2-206ENST00000474617 GRID2IPA4D2P6 1211 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 K7ERI5 159 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 KLRC1P26715 233 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 DLG4P78352 724 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 GPR162Q16538 588 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 ZPBP2Q6X784 338 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 MOB2Q70IA6 237 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 ANKRD23Q86SG2 305 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 CBWD2Q8IUF1 395 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 ATP8B4Q8TF62 1192 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 SCFD2Q8WU76 684 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 FGD4Q96M96 766 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 PCYT2Q99447 389 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 GPR20Q99678 358 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 C2orf40Q9H1Z8 148 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 HDAC6Q9UBN7 1215 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 ADGRA3Q8IWK6 1321 aa23.56■■□□□ 1.36
CCM2-206ENST00000474617 TISP43B9A030 160 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 SOCS7O14512 581 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 ADRB2P07550 413 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 TMEM253P0C7T8 217 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 GLRA2P23416 452 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 FSTL1Q12841 308 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 PSMD6Q15008 389 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 SLC39A4Q6P5W5 647 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 TRMT1LQ7Z2T5 733 aaKnown RBP23.55■■□□□ 1.36
CCM2-206ENST00000474617 DHX38Q92620 1227 aaKnown RBP23.55■■□□□ 1.36
CCM2-206ENST00000474617 KIFC3Q9BVG8 833 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 SMARCAD1Q9H4L7 1026 aa23.55■■□□□ 1.36
CCM2-206ENST00000474617 UBE2TQ9NPD8 197 aaPredicted RBP23.55■■□□□ 1.36
CCM2-206ENST00000474617 AJAP1Q9UKB5 411 aaPredicted RBP23.55■■□□□ 1.36
CCM2-206ENST00000474617 DIS3Q9Y2L1 958 aaKnown RBP23.55■■□□□ 1.36
CCM2-206ENST00000474617 DDX3XO00571 662 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCM2-206ENST00000474617 ADCY3O60266 1144 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 ZSCAN20P17040 1043 aaPredicted RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 TNFAIP3P21580 790 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 AP3M2P53677 418 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 TCEAL1Q15170 157 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 MEI1Q5TIA1 1274 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 CCDC181Q5TID7 509 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 CCDC62Q6P9F0 684 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 GJB7Q6PEY0 223 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 CREG2Q8IUH2 290 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 DHX37Q8IY37 1157 aaKnown RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 MSL3Q8N5Y2 521 aaKnown RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 ZNF526Q8TF50 670 aaPredicted RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 PSPC1Q8WXF1 523 aaKnown RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 NT5C1BQ96P26 610 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 VTA1Q9NP79 307 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 MORF4L1Q9UBU8 362 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 NCANO14594 1321 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 LRRIQ3A6PVS8 624 aaPredicted RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 PALMO75781 387 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 ZRANB2O95218 330 aaKnown RBP eCLIP23.54■■□□□ 1.36
CCM2-206ENST00000474617 GCNT1Q02742 428 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 GRM1Q13255 1194 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 ENOX2Q16206 610 aaKnown RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 Q3C1V9 767 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 CFAP221Q4G0U5 840 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 TAS1R3Q7RTX0 852 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 MMGT1Q8N4V1 131 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 CTNNBL1Q8WYA6 563 aaPredicted RBP23.54■■□□□ 1.36
CCM2-206ENST00000474617 TLR10Q9BXR5 811 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 ANKZF1Q9H8Y5 726 aa23.54■■□□□ 1.36
CCM2-206ENST00000474617 MAP9Q49MG5 647 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 FAM71AQ8IYT1 594 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 PLEKHO2Q8TD55 490 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 ASAP3Q8TDY4 903 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 TAF4BQ92750 862 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 GLG1Q92896 1179 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 SAAL1Q96ER3 474 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 AGPAT1Q99943 283 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 RAB20Q9NX57 234 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 SALL4Q9UJQ4 1053 aa23.53■■□□□ 1.36
CCM2-206ENST00000474617 AGO2Q9UKV8 859 aaKnown RBP23.53■■□□□ 1.36
CCM2-206ENST00000474617 IGKV6-21A0A0C4DH24 114 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 ANKRD62A6NC57 917 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 LRRIQ4A6NIV6 560 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 ASAP2O43150 1006 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 ZBTB48P10074 688 aaPredicted RBP23.52■■□□□ 1.36
CCM2-206ENST00000474617 GZMAP12544 262 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 GJA5P36382 358 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 HADHBP55084 474 aaKnown RBP23.52■■□□□ 1.36
CCM2-206ENST00000474617 LAMC2Q13753 1193 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 CLUL1Q15846 466 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 GLE1Q53GS7 698 aaKnown RBP23.52■■□□□ 1.36
CCM2-206ENST00000474617 CDCA2Q69YH5 1023 aaPredicted RBP23.52■■□□□ 1.36
CCM2-206ENST00000474617 CC2D1AQ6P1N0 951 aaPredicted RBP23.52■■□□□ 1.36
CCM2-206ENST00000474617 ZBTB8OSQ8IWT0 167 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 RHOT2Q8IXI1 618 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 ANKRD13CQ8N6S4 541 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 U2AF1L4Q8WU68 220 aaKnown RBP23.52■■□□□ 1.36
CCM2-206ENST00000474617 RFFLQ8WZ73 363 aa23.52■■□□□ 1.36
CCM2-206ENST00000474617 SHC3Q92529 594 aa23.52■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms