RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 TTC25Q96NG3 672 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 PNMA5Q96PV4 448 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 TRAPPC9Q96Q05 1148 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 TMEM47Q9BQJ4 181 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 RABEP2Q9H5N1 569 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 ECT2Q9H8V3 914 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 OLFML3Q9NRN5 406 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 ADARB2Q9NS39 739 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 STOML1Q9UBI4 398 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 DDX25Q9UHL0 483 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 SMG5Q9UPR3 1016 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 DNM3Q9UQ16 869 aa8.62□□□□□ -1.03
CCDC93-208ENST00000474546 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.62□□□□□ -1.03
CCDC93-208ENST00000474546 ADGRA3Q8IWK6 1321 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 CYP3A7-CYP3A51PA0A087WV96 503 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SPDYE3A6NKU9 549 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ENO4A6NNW6 628 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 PHF20L1A8MW92 1017 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 KIAA0391O15091 583 aaKnown RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 CDH16O75309 829 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SMNDC1O75940 238 aaKnown RBP eCLIP8.61□□□□□ -1.032e-8■■■■□ 20
CCDC93-208ENST00000474546 RGS20O76081 388 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 UNC5CO95185 931 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ZWINTO95229 277 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ECEL1O95672 775 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ABHD2P08910 425 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 PLA2G4BP0C869 781 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ZBTB48P10074 688 aaPredicted RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 GZMAP12544 262 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SKIP12755 728 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ACADSP16219 412 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 TNFAIP3P21580 790 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 CYP3A7P24462 503 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 CTNNA2P26232 953 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 PON1P27169 355 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 CLCN2P51788 898 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 EIF6P56537 245 aaKnown RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ROR2Q01974 943 aaKnown RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ENPEPQ07075 957 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 KLRC3Q07444 240 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 PLS1Q14651 629 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 RASA2Q15283 850 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 E2F5Q15329 346 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 CNGA2Q16280 664 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 FAM47AQ5JRC9 791 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SUSD4Q5VX71 490 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SLC30A9Q6PML9 568 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 C15orf52Q6ZUT6 534 aaKnown RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 C16orf86Q6ZW13 317 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 DYMQ7RTS9 669 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ZNF571Q7Z3V5 609 aaPredicted RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ADGRA1Q86SQ6 560 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 USP37Q86T82 979 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 FAM228AQ86W67 206 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SLC30A5Q8TAD4 765 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 CKAP2Q8WWK9 683 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ART4Q93070 314 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 TRIM11Q96F44 468 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 FAM84BQ96KN1 310 aaPredicted RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 FAM20AQ96MK3 541 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ELAC2Q9BQ52 826 aaKnown RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 LRMDAQ9H2I8 198 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 GBA2Q9HCG7 927 aaPredicted RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SSU72Q9NP77 194 aaKnown RBP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SAR1AQ9NR31 198 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ZFATQ9P243 1243 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 UVRAGQ9P2Y5 699 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 LGALS13Q9UHV8 139 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 PNMA2Q9UL42 364 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 STX8Q9UNK0 236 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 ZBTB1Q9Y2K1 713 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 FRMD4BQ9Y2L6 1034 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.61□□□□□ -1.03
CCDC93-208ENST00000474546 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 USH1CQ9Y6N9 552 aa8.61□□□□□ -1.03
CCDC93-208ENST00000474546 LOXHD1Q8IVV2 1947 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 COL5A3P25940 1745 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 IRS2Q9Y4H2 1338 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 SLX4Q8IY92 1834 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 ZSCAN5CA6NGD5 496 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 SMAPO00193 183 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 TRAFD1O14545 582 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 PMM2O15305 246 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 RIPK2O43353 540 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 THAP12O43422 761 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 CAND2O75155 1236 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 SNUPNO95149 360 aaKnown RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 SSBP05455 408 aaKnown RBP eCLIP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 KRT13P13646 458 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 PECAM1P16284 738 aaPredicted RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 SCP2P22307 547 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 CALB2P22676 271 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 STX2P32856 288 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 YARSP54577 528 aaKnown RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 NCALDP61601 193 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 DYNLL1P63167 89 aaKnown RBP8.6□□□□□ -1.03
CCDC93-208ENST00000474546 PPATQ06203 517 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 KIF22Q14807 665 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 EPHA7Q15375 998 aa8.6□□□□□ -1.03
CCDC93-208ENST00000474546 MTFR1Q15390 333 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms