RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PPFIBP1Q86W92 1011 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 EDAQ92838 391 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 CPB2Q96IY4 423 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 KIF2CQ99661 725 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 EIF2AQ9BY44 585 aaKnown RBP22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 ADAM7Q9H2U9 754 aa22.58■■□□□ 1.21
PDLIM4-206ENST00000474421 MED24O75448 989 aa22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 DDHD2O94830 711 aa22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 ARF4P18085 180 aaPredicted RBP22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 AMHR2Q16671 573 aa22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 C8orf34Q49A92 452 aa22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 BCL7CQ8WUZ0 217 aaPredicted RBP22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 PRIMPOLQ96LW4 560 aa22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 EMILIN2Q9BXX0 1053 aa22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 GIT1Q9Y2X7 761 aa22.57■■□□□ 1.2
PDLIM4-206ENST00000474421 ZMYM2Q9UBW7 1377 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 A0A087WWV3 80 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 ARL5CA6NH57 179 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 LRRIQ4A6NIV6 560 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 NR1I2O75469 434 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 AFF1P51825 1210 aaKnown RBP22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 SLC27A1Q6PCB7 646 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 ZBTB8OSQ8IWT0 167 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 AUTS2Q8WXX7 1259 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 RIPOR3Q96MK2 946 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 APOL5Q9BWW9 433 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 C2orf40Q9H1Z8 148 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 PRMT7Q9NVM4 692 aaPredicted RBP22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 SSX2IPQ9Y2D8 614 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 NR2E1Q9Y466 385 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 KIF3AQ9Y496 699 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 STK24Q9Y6E0 443 aa22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 TDRD15B5MCY1 1934 aaKnown RBP22.56■■□□□ 1.2
PDLIM4-206ENST00000474421 A0A1B0GUA9 196 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 ARHGEF35A5YM69 484 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 NRP1O14786 923 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 B4GALT3O60512 393 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 MTHFRP42898 656 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 PTPN14Q15678 1187 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 POTEGQ6S5H5 508 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 PPP4R3CPQ6ZMV5 832 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 MAEAQ7L5Y9 396 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 MFSD14AQ96MC6 490 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 GAD1Q99259 594 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 RAB34Q9BZG1 259 aa22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 DAXXQ9UER7 740 aaPredicted RBP22.55■■□□□ 1.2
PDLIM4-206ENST00000474421 U2AF2P26368 475 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 MLH1P40692 756 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 FXR2P51116 673 aaKnown RBP eCLIP22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 RABEP1Q15276 862 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 CDCA2Q69YH5 1023 aaPredicted RBP22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 PADI6Q6TGC4 694 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 COLGALT2Q8IYK4 626 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 VN1R3Q9BXE9 311 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 RNF39Q9H2S5 420 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 GPRC5CQ9NQ84 441 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 MRPL17Q9NRX2 175 aaKnown RBP22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 HES2Q9Y543 173 aa22.54■■□□□ 1.2
PDLIM4-206ENST00000474421 TECTAO75443 2155 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 ST18O60284 1047 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 CYP11B2P19099 503 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 OR1G1P47890 313 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 ZXDAP98168 799 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 DSC1Q08554 894 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 PDIA5Q14554 519 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 FAM187BQ17R55 369 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 SLC22A17Q8WUG5 538 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 APOL6Q9BWW8 343 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 KCNH6Q9H252 994 aa22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 NXF3Q9H4D5 531 aaKnown RBP22.53■■□□□ 1.2
PDLIM4-206ENST00000474421 B4GALT5O43286 388 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 NPTXRO95502 500 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 SOD2P04179 222 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 URODP06132 367 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 EPCAMP16422 314 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 KLRC2P26717 231 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 CCT6AP40227 531 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 SCNN1GP51170 649 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 PPP2R5AQ15172 486 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 ATAT1Q5SQI0 421 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 RARS2Q5T160 578 aaKnown RBP22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 TRIM67Q6ZTA4 783 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 HFE2Q6ZVN8 426 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 CABP7Q86V35 215 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 ZFP42Q96MM3 310 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 COLEC11Q9BWP8 271 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 FZD8Q9H461 694 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 LRWD1Q9UFC0 647 aa22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 PRG3Q9Y2Y8 225 aaPredicted RBP22.52■■□□□ 1.2
PDLIM4-206ENST00000474421 MUC6Q6W4X9 2439 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 LAD1O00515 517 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 N4BP3O15049 544 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 SSBP05455 408 aaKnown RBP eCLIP22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 NAMPTP43490 491 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 MAPK6Q16659 721 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 KIAA1841Q6NSI8 718 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 BMP8AQ7Z5Y6 402 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 C4orf32Q8N8J7 132 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 KLHL5Q96PQ7 755 aa22.51■■□□□ 1.19
PDLIM4-206ENST00000474421 HERC2P3Q9BVR0 1158 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms