RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.39□□□□□ -0.59
CASC3-204ENST00000474190 ZNF365Q70YC5 407 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 TMEM192Q8IY95 271 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 ADSSL1Q8N142 457 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 TMEM199Q8N511 208 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 TMEM174Q8WUU8 243 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 SMARCE1Q969G3 411 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 PRIMPOLQ96LW4 560 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 RNF39Q9H2S5 420 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 SEMA6BQ9H3T3 888 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 RGS18Q9NS28 235 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 EXOC1Q9NV70 894 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 PRMT7Q9NVM4 692 aaPredicted RBP11.39□□□□□ -0.59
CASC3-204ENST00000474190 TNFSF13BQ9Y275 285 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 NR2E3Q9Y5X4 410 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 COL4A6Q14031 1691 aa11.39□□□□□ -0.59
CASC3-204ENST00000474190 TANC1Q9C0D5 1861 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 A0A0B4J269 797 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 M0QZ92 97 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 GPR182O15218 404 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 GCNT3O95395 438 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 SFPQP23246 707 aaKnown RBP eCLIP11.38□□□□□ -0.59
CASC3-204ENST00000474190 SMTNP53814 917 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 WNT7BP56706 349 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 DEFB103AP81534 67 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 MCL1Q07820 350 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 NFX1Q12986 1120 aaKnown RBP11.38□□□□□ -0.59
CASC3-204ENST00000474190 PAK2Q13177 524 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 MAPK6Q16659 721 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 DPCR1Q3MIW9 517 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 CNKSR3Q6P9H4 555 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 CRELD2Q6UXH1 353 aaPredicted RBP11.38□□□□□ -0.59
CASC3-204ENST00000474190 ZPBP2Q6X784 338 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 CATSPER4Q7RTX7 472 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 ZBTB8OSQ8IWT0 167 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 ZC3H3Q8IXZ2 948 aaKnown RBP11.38□□□□□ -0.59
CASC3-204ENST00000474190 GUF1Q8N442 669 aaKnown RBP11.38□□□□□ -0.59
CASC3-204ENST00000474190 DEFB123Q8N688 67 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 CEP120Q8N960 986 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 HERVK_113Q902F9 699 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 HVCN1Q96D96 273 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 ADAM2Q99965 735 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 GZF1Q9H116 711 aaPredicted RBP11.38□□□□□ -0.59
CASC3-204ENST00000474190 CDT1Q9H211 546 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 RC3H2Q9HBD1 1191 aaKnown RBP11.38□□□□□ -0.59
CASC3-204ENST00000474190 CHST12Q9NRB3 414 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 DMAC2Q9NW81 257 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 MAPK8IP1Q9UQF2 711 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 SCN5AQ14524 2016 aa11.38□□□□□ -0.59
CASC3-204ENST00000474190 A0A0U1RQF3 1178 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 ZNF623O75123 536 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 SMC2O95347 1197 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 PFKMP08237 780 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 SCP2P22307 547 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 AFF1P51825 1210 aaKnown RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 MCCD1P59942 119 aaPredicted RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 WDR5P61964 334 aaKnown RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 PPIGQ13427 754 aaKnown RBP eCLIP11.37□□□□□ -0.596e-7■□□□□ 10.8
CASC3-204ENST00000474190 PRPF4BQ13523 1007 aaKnown RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 ALCAMQ13740 583 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 SHHQ15465 462 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 ATF7IP2Q5U623 682 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 FAM109BQ6ICB4 259 aaPredicted RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 CENPPQ6IPU0 288 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 OTOP2Q7RTS6 562 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 TMCO2Q7Z6W1 182 aaPredicted RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 MRPL10Q7Z7H8 261 aaKnown RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 NELFCDQ8IXH7 590 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 GSTCDQ8NEC7 633 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 SEPT8Q92599 483 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 SCLT1Q96NL6 688 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 DUSP9Q99956 384 aaKnown RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 CBWD1Q9BRT8 395 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 MRPL4Q9BYD3 311 aaKnown RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 AGPAT3Q9NRZ7 376 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 PIN4Q9Y237 131 aaKnown RBP11.37□□□□□ -0.59
CASC3-204ENST00000474190 STXBP5LQ9Y2K9 1186 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 HES2Q9Y543 173 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 PCDHB13Q9Y5F0 798 aa11.37□□□□□ -0.59
CASC3-204ENST00000474190 KAT6AQ92794 2004 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 UBE4BO95155 1302 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 TOM1L1O75674 476 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 ADRB2P07550 413 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 LINC00271P0C7V0 271 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 AXLP30530 894 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 BMP8BP34820 402 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 KNOP1Q1ED39 458 aaKnown RBP11.36□□□□□ -0.59
CASC3-204ENST00000474190 TTI2Q6NXR4 508 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 AGMOQ6ZNB7 445 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 LRRC55Q6ZSA7 311 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 ECHDC2Q86YB7 292 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 C12orf56Q8IXR9 622 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 MYOCDQ8IZQ8 938 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 TRIML1Q8N9V2 468 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 APBB2Q92870 758 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 FBXL18Q96ME1 805 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 ACCSQ96QU6 501 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 NXF3Q9H4D5 531 aaKnown RBP11.36□□□□□ -0.59
CASC3-204ENST00000474190 PRKAG2Q9UGJ0 569 aa11.36□□□□□ -0.59
CASC3-204ENST00000474190 KCNG1Q9UIX4 513 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms