RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 UPK3BL1B0FP48 263 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 UPK3BL2E5RIL1 263 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 USO1O60763 962 aaKnown RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 PFDN1O60925 122 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 PRPF6O94906 941 aaKnown RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CCND1P24385 295 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 MATR3P43243 847 aaKnown RBP eCLIP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CD97P48960 835 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 SCNN1BP51168 640 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 PPP2R5EQ16537 467 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 BCL2A1Q16548 175 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CDPF1Q6NVV7 123 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 RBM43Q6ZSC3 357 aaKnown RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 C3orf62Q6ZUJ4 267 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CCDC121Q6ZUS5 278 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 NLRC3Q7RTR2 1065 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 SRGAP1Q7Z6B7 1085 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 ZNF554Q86TJ5 538 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 TXNRD3Q86VQ6 643 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 MCATQ8IVS2 390 aaKnown RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 MRPL41Q8IXM3 137 aaKnown RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 FAM186BQ8IYM0 893 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 LSMEM2Q8N112 164 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 TTC30BQ8N4P2 665 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 STKLD1Q8NE28 680 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 RASSF8Q8NHQ8 419 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 GDAP1Q8TB36 358 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CCDC110Q8TBZ0 833 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 NSMCE1Q8WV22 266 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 MEGF10Q96KG7 1140 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 PPP1R13BQ96KQ4 1090 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 NR1H4Q96RI1 486 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 TM9SF2Q99805 663 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 DPH2Q9BQC3 489 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 OSBPL2Q9H1P3 480 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CLK4Q9HAZ1 481 aaKnown RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 PARVGQ9HBI0 331 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 MYO1AQ9UBC5 1043 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 DSEQ9UL01 958 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CFAP45Q9UL16 551 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 TTC7AQ9ULT0 858 aaPredicted RBP7.92□□□□□ -1.14
GPNMB-209ENST00000474157 MAFFQ9ULX9 164 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 SQORQ9Y6N5 450 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CDHR2Q9BYE9 1310 aa7.92□□□□□ -1.14
GPNMB-209ENST00000474157 CCDC69A6NI79 296 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 BECN2A8MW95 431 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 RNF225M0QZC1 329 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 NDUFAB1O14561 156 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 AP5Z1O43299 807 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SKAP2O75563 359 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 URI1O94763 535 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 GSTA1P08263 222 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 NME1P15531 152 aaKnown RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 ENPP1P22413 925 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 MLH1P40692 756 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 YARSP54577 528 aaKnown RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 TGFB2P61812 414 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 MXRA7P84157 204 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 CDK17Q00537 523 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 RAB33AQ14088 237 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 ADRM1Q16186 407 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 NDUFA5Q16718 116 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SLC44A4Q53GD3 710 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SGO2Q562F6 1265 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SLC6A19Q695T7 634 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 NEPROQ6NW34 567 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 CEP128Q6ZU80 1094 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 HOOK3Q86VS8 718 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 HOMER1Q86YM7 354 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 LURAP1LQ8IV03 231 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SLC15A3Q8IY34 581 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 CRACR2BQ8N4Y2 399 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 RNF10Q8N5U6 811 aaKnown RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 UTP4Q969X6 686 aaKnown RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SNF8Q96H20 258 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SH3GL2Q99962 352 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 CARD6Q9BX69 1037 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 INO80BQ9C086 356 aaPredicted RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 TNKS2Q9H2K2 1166 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 TNMDQ9H2S6 317 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 ACSS3Q9H6R3 686 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 CNNM2Q9H8M5 875 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 ZNF304Q9HCX3 659 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 DDX19AQ9NUU7 478 aaKnown RBP7.91□□□□□ -1.14
GPNMB-209ENST00000474157 RTEL1Q9NZ71 1219 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 NDUFA13Q9P0J0 144 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 HESX1Q9UBX0 185 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 DAGLAQ9Y4D2 1042 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 SPO11Q9Y5K1 396 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 C10orf71Q711Q0 1435 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 COL24A1Q17RW2 1714 aa7.91□□□□□ -1.14
GPNMB-209ENST00000474157 NHSQ6T4R5 1651 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 UBN2Q6ZU65 1347 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 KRBA1A5PL33 1030 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 BTBD19C9JJ37 291 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 IDH3BO43837 385 aa7.9□□□□□ -1.14
GPNMB-209ENST00000474157 BAG3O95817 575 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms