RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 TPCN1Q9ULQ1 816 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 DENND4AQ7Z401 1863 aa12.52□□□□□ -0.41
ACTB-209ENST00000473257 ARL5CA6NH57 179 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 TEX28O15482 410 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 MARCH6O60337 910 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 ALDH2P05091 517 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 P4HBP07237 508 aaKnown RBP12.51□□□□□ -0.41
ACTB-209ENST00000473257 ITGA4P13612 1032 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 RPL17P18621 184 aaKnown RBP12.51□□□□□ -0.41
ACTB-209ENST00000473257 AKAP5P24588 427 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 CDC42EP1Q00587 391 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 SPIRE1Q08AE8 756 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 POTEGQ6S5H5 508 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 MOXD1Q6UVY6 613 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 FERMT3Q86UX7 667 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 PALB2Q86YC2 1186 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 TPH2Q8IWU9 490 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 NECAB1Q8N987 351 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 NXF3Q9H4D5 531 aaKnown RBP12.51□□□□□ -0.41
ACTB-209ENST00000473257 SFXN1Q9H9B4 322 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 KCNK12Q9HB15 430 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 MRPL17Q9NRX2 175 aaKnown RBP12.51□□□□□ -0.41
ACTB-209ENST00000473257 KLK14Q9P0G3 267 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 USP20Q9Y2K6 914 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 IPPQ9Y573 584 aa12.51□□□□□ -0.41
ACTB-209ENST00000473257 CCDC195A0A1B0GUA6 201 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 INO80B-WBP1J3KQ70 363 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 LARGE1O95461 756 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 NCLP19338 710 aaKnown RBP12.5□□□□□ -0.41
ACTB-209ENST00000473257 RFC5P40937 340 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 CAPSQ13938 189 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 EPHA7Q15375 998 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 AMHR2Q16671 573 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 CCDC149Q6ZUS6 474 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 MAEAQ7L5Y9 396 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 SRGAP1Q7Z6B7 1085 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 COLGALT2Q8IYK4 626 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 SIX5Q8N196 739 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 FAM20AQ96MK3 541 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 RPS6KC1Q96S38 1066 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 MYADMQ96S97 322 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 JPH2Q9BR39 696 aaPredicted RBP12.5□□□□□ -0.41
ACTB-209ENST00000473257 HERC2P3Q9BVR0 1158 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 EMILIN2Q9BXX0 1053 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 CXCL16Q9H2A7 254 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 ARID2Q68CP9 1835 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 DOCK6Q96HP0 2047 aa12.5□□□□□ -0.41
ACTB-209ENST00000473257 PRR23AA6NEV1 266 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 TTLL13PA6NNM8 815 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 ERLIN2O94905 339 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 SLITRK3O94933 977 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 SOD2P04179 222 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 URODP06132 367 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 CFHP08603 1231 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 GBP2P32456 591 aaPredicted RBP12.49□□□□□ -0.41
ACTB-209ENST00000473257 MBTD1Q05BQ5 628 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 TDGQ13569 410 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 KIAA0319Q5VV43 1072 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 PPP4R3AQ6IN85 833 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 GALNT17Q6IS24 598 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 CPLX2Q6PUV4 134 aaKnown RBP12.49□□□□□ -0.41
ACTB-209ENST00000473257 OTOP3Q7RTS5 596 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 PPFIBP1Q86W92 1011 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 C4orf19Q8IY42 314 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 PIGOQ8TEQ8 1089 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 ZNF707Q96C28 371 aaPredicted RBP12.49□□□□□ -0.41
ACTB-209ENST00000473257 ACSF2Q96CM8 615 aaPredicted RBP12.49□□□□□ -0.41
ACTB-209ENST00000473257 MTRQ99707 1265 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 EIF2AK1Q9BQI3 630 aaKnown RBP12.49□□□□□ -0.41
ACTB-209ENST00000473257 PAAF1Q9BRP4 392 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 TMEM175Q9BSA9 504 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 GPR62Q9BZJ7 368 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 GPRC5CQ9NQ84 441 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 ORC3Q9UBD5 711 aaPredicted RBP12.49□□□□□ -0.41
ACTB-209ENST00000473257 FBXL21Q9UKT6 434 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 USTQ9Y2C2 406 aa12.49□□□□□ -0.41
ACTB-209ENST00000473257 CNTNAP2Q9UHC6 1331 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 KRBA1A5PL33 1030 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 INPPL1O15357 1258 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 NPTXRO95502 500 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 EFEMP2O95967 443 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 FDPSP14324 419 aaKnown RBP12.48□□□□□ -0.41
ACTB-209ENST00000473257 ARF4P18085 180 aaPredicted RBP12.48□□□□□ -0.41
ACTB-209ENST00000473257 GLUD2P49448 558 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 PTENP60484 403 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 DSC1Q08554 894 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 GIT2Q14161 759 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 PLCD3Q8N3E9 789 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 TNFRSF25Q93038 417 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 SNX27Q96L92 541 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 TM6SF1Q9BZW5 370 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 CSRNP2Q9H175 543 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 ZSWIM4Q9H7M6 989 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 CA14Q9ULX7 337 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 COL4A3Q01955 1670 aa12.48□□□□□ -0.41
ACTB-209ENST00000473257 DOCK8Q8NF50 2099 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 GPR179Q6PRD1 2367 aa12.47□□□□□ -0.41
ACTB-209ENST00000473257 STK25O00506 426 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms