RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 ADAMTS19Q8TE59 1207 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 ATXN2LQ8WWM7 1075 aaKnown RBP10.9□□□□□ -0.66
APTX-216ENST00000472896 BORCS6Q96GS4 357 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 NAF1Q96HR8 494 aaKnown RBP10.9□□□□□ -0.66
APTX-216ENST00000472896 MAML3Q96JK9 1138 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 INPP4AQ96PE3 977 aaPredicted RBP10.9□□□□□ -0.66
APTX-216ENST00000472896 PHF20Q9BVI0 1012 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 OSBPL1AQ9BXW6 950 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 PRDM12Q9H4Q4 367 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 POLD4Q9HCU8 107 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 TMEM39AQ9NV64 488 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 SMARCAL1Q9NZC9 954 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 EHD2Q9NZN4 543 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 ARHGAP20Q9P2F6 1191 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 SERPINB13Q9UIV8 391 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 GDAQ9Y2T3 454 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 L3MBTL1Q9Y468 752 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 ABCB11O95342 1321 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 MYH7P12883 1935 aa10.9□□□□□ -0.66
APTX-216ENST00000472896 ESYT3A0FGR9 886 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 CCDC188H7C350 402 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 NCK2O43639 380 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 RHOBTB3O94955 611 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 CCNE1P24864 410 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 ECHS1P30084 290 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 ADD2P35612 726 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 MTIF2P46199 727 aaKnown RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 MAGOHP61326 146 aaKnown RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 UBE3CQ15386 1083 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 TAF11Q15544 211 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 CCDC85BQ15834 202 aaPredicted RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 TBC1D25Q3MII6 688 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 ANKRD20A2Q5SQ80 823 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 MEI1Q5TIA1 1274 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 ANKRD20A1Q5TYW2 823 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 ANKRD20A3Q5VUR7 823 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 ARL6IP4Q66PJ3 421 aaKnown RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 SHCBP1Q8NEM2 672 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 OXER1Q8TDS5 423 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 TAF4BQ92750 862 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 MAGOHBQ96A72 148 aaKnown RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 LENG1Q96BZ8 264 aaPredicted RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.9□□□□□ -0.673e-6■■□□□ 12.8
APTX-216ENST00000472896 NOC4LQ9BVI4 516 aaKnown RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 MAGEF1Q9HAY2 307 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 CHCHD3Q9NX63 227 aaKnown RBP10.9□□□□□ -0.67
APTX-216ENST00000472896 HOXC10Q9NYD6 342 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 LRRC42Q9Y546 428 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 MYH1P12882 1939 aa10.9□□□□□ -0.67
APTX-216ENST00000472896 ZNFX1Q9P2E3 1918 aaKnown RBP10.89□□□□□ -0.67
APTX-216ENST00000472896 A0A1W2PQ45 241 aaPredicted RBP10.89□□□□□ -0.67
APTX-216ENST00000472896 A0A1W2PQY0 241 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 SMIM24O75264 130 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 SETSIPP0DME0 302 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 GNAT1P11488 350 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 ALDH3A1P30838 453 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 GBP1P32455 592 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 SKIV2L2P42285 1042 aaKnown RBP10.89□□□□□ -0.67
APTX-216ENST00000472896 NCALDP61601 193 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 MAP3K12Q12852 859 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 WTAPQ15007 396 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 GALNTL6Q49A17 601 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 COBLL1Q53SF7 1204 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 TYW1BQ6NUM6 668 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 CSGALNACT2Q8N6G5 542 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 GIMAP8Q8ND71 665 aaPredicted RBP10.89□□□□□ -0.67
APTX-216ENST00000472896 SCFD2Q8WU76 684 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 UBLCP1Q8WVY7 318 aaPredicted RBP10.89□□□□□ -0.67
APTX-216ENST00000472896 FAM122AQ96E09 287 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 MS4A14Q96JA4 679 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 NECAB3Q96P71 396 aaPredicted RBP10.89□□□□□ -0.67
APTX-216ENST00000472896 RAB3IPQ96QF0 476 aaPredicted RBP10.89□□□□□ -0.67
APTX-216ENST00000472896 MTRQ99707 1265 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 MYL10Q9BUA6 226 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 PBX4Q9BYU1 374 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 XPNPEP3Q9NQH7 507 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 FAM114A2Q9NRY5 505 aa10.89□□□□□ -0.67
APTX-216ENST00000472896 TRIM49BA6NDI0 452 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ZSCAN5CA6NGD5 496 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 BTNL10A8MVZ5 291 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 O00370 1275 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 SART1O43290 800 aaKnown RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 CAND2O75155 1236 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 COQ9O75208 318 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ALDH5A1P51649 535 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 MRPS5P82675 430 aaKnown RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 MXRA7P84157 204 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 PSMD2Q13200 908 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 LAMB3Q13751 1172 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 PLS1Q14651 629 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 NAB2Q15742 525 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ASTE1Q2TB18 679 aaPredicted RBP10.88□□□□□ -0.67
APTX-216ENST00000472896 KRT71Q3SY84 523 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 TMEM240Q5SV17 173 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 AKNAD1Q5T1N1 836 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ARHGAP22Q7Z5H3 698 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 NCAPG2Q86XI2 1143 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 SIAH1Q8IUQ4 282 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 ACTRT1Q8TDG2 376 aa10.88□□□□□ -0.67
APTX-216ENST00000472896 SYN2Q92777 582 aaPredicted RBP10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms