RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 ITIH3Q06033 890 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 ZNF174Q15697 407 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 C8orf34Q49A92 452 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 TPRNQ4KMQ1 711 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 CPB2Q96IY4 423 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 FAM193BQ96PV7 902 aaPredicted RBP16.98■□□□□ 0.31
VTI1A-203ENST00000472892 APOL5Q9BWW9 433 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 POLR3FQ9H1D9 316 aaPredicted RBP16.98■□□□□ 0.31
VTI1A-203ENST00000472892 ADAM7Q9H2U9 754 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 FAN1Q9Y2M0 1017 aa16.98■□□□□ 0.31
VTI1A-203ENST00000472892 A0A1B0GUA9 196 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.97■□□□□ 0.31
VTI1A-203ENST00000472892 ARL5CA6NH57 179 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 NRP1O14786 923 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 OR52Z1P0C646 297 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 RPA1P27694 616 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 TRAPPC10P48553 1259 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 NOSTRINQ8IVI9 506 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 C4orf32Q8N8J7 132 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 SLC22A17Q8WUG5 538 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 GPRC5CQ9NQ84 441 aa16.97■□□□□ 0.31
VTI1A-203ENST00000472892 USO1O60763 962 aaKnown RBP16.96■□□□□ 0.31
VTI1A-203ENST00000472892 LILRB3O75022 631 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 CA8P35219 290 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 PTPN14Q15678 1187 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 TTC38Q5R3I4 469 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 CES5AQ6NT32 575 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 HFE2Q6ZVN8 426 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 COLGALT2Q8IYK4 626 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 FAM184AQ8NB25 1140 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 TMEM87AQ8NBN3 555 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 MCPH1Q8NEM0 835 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 ERMNQ8TAM6 284 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 NECTIN4Q96NY8 510 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 GAD1Q99259 594 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 MIOSQ9NXC5 875 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 GIT1Q9Y2X7 761 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 HES2Q9Y543 173 aa16.96■□□□□ 0.31
VTI1A-203ENST00000472892 B4GALT5O43286 388 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 EFEMP2O95967 443 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 EPCAMP16422 314 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 MUTP22033 750 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 U2AF2P26368 475 aaKnown RBP eCLIP16.95■□□□□ 0.3
VTI1A-203ENST00000472892 ZXDAP98168 799 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 DSC1Q08554 894 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 CDCA2Q69YH5 1023 aaPredicted RBP16.95■□□□□ 0.3
VTI1A-203ENST00000472892 SLC27A1Q6PCB7 646 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 PADI6Q6TGC4 694 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 TRIM67Q6ZTA4 783 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 MAEAQ7L5Y9 396 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 BMP8AQ7Z5Y6 402 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 PPFIBP1Q86W92 1011 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 GSTCDQ8NEC7 633 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 FZD8Q9H461 694 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 DZANK1Q9NVP4 752 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 MARCH5Q9NX47 278 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 TRIOO75962 3097 aa16.95■□□□□ 0.3
VTI1A-203ENST00000472892 CYP11B2P19099 503 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 MLH1P40692 756 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 FXR2P51116 673 aaKnown RBP eCLIP16.94■□□□□ 0.3
VTI1A-203ENST00000472892 GNL2Q13823 731 aaKnown RBP16.94■□□□□ 0.3
VTI1A-203ENST00000472892 PDIA5Q14554 519 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 FAM187BQ17R55 369 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 POTEGQ6S5H5 508 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 HACE1Q8IYU2 909 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 C12orf76Q8N812 135 aaPredicted RBP16.94■□□□□ 0.3
VTI1A-203ENST00000472892 PRIMPOLQ96LW4 560 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 MFSD14AQ96MC6 490 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 ZFP42Q96MM3 310 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 KLHL5Q96PQ7 755 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 EMILIN2Q9BXX0 1053 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 TRIM6Q9C030 488 aaPredicted RBP16.94■□□□□ 0.3
VTI1A-203ENST00000472892 CDH22Q9UJ99 828 aa16.94■□□□□ 0.3
VTI1A-203ENST00000472892 NOL7Q9UMY1 257 aaKnown RBP16.94■□□□□ 0.3
VTI1A-203ENST00000472892 LRRIQ4A6NIV6 560 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 SOD2P04179 222 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 CNPP09543 421 aaKnown RBP16.93■□□□□ 0.3
VTI1A-203ENST00000472892 MTHFRP42898 656 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 TOB1P50616 345 aaPredicted RBP16.93■□□□□ 0.3
VTI1A-203ENST00000472892 SCNN1GP51170 649 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 ATAT1Q5SQI0 421 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 TAS1R1Q7RTX1 841 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 CDR2LQ86X02 465 aaPredicted RBP16.93■□□□□ 0.3
VTI1A-203ENST00000472892 RNF168Q8IYW5 571 aaPredicted RBP16.93■□□□□ 0.3
VTI1A-203ENST00000472892 RIPOR3Q96MK2 946 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 APOL6Q9BWW8 343 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 NXF3Q9H4D5 531 aaKnown RBP16.93■□□□□ 0.3
VTI1A-203ENST00000472892 POMKQ9H5K3 350 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 MRPL17Q9NRX2 175 aaKnown RBP16.93■□□□□ 0.3
VTI1A-203ENST00000472892 PRMT7Q9NVM4 692 aaPredicted RBP16.93■□□□□ 0.3
VTI1A-203ENST00000472892 NR2E1Q9Y466 385 aa16.93■□□□□ 0.3
VTI1A-203ENST00000472892 ZMYM2Q9UBW7 1377 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 ARHGEF35A5YM69 484 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 TMEM221A6NGB7 291 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 M0R296 226 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 NPTXRO95502 500 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 SSBP05455 408 aaKnown RBP eCLIP16.92■□□□□ 0.3
VTI1A-203ENST00000472892 AKAP5P24588 427 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 KLRC2P26717 231 aa16.92■□□□□ 0.3
VTI1A-203ENST00000472892 OR1G1P47890 313 aa16.92■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms