RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 MAML3Q96JK9 1138 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 RNPC3Q96LT9 517 aaKnown RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 GLT1D1Q96MS3 346 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 MMP19Q99542 508 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 RIOK1Q9BRS2 568 aaKnown RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 MOV10L1Q9BXT6 1211 aaKnown RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 TEX13BQ9BXU2 312 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 VCPKMTQ9H867 229 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 KANSL2Q9H9L4 492 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 XPNPEP3Q9NQH7 507 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 SUSD2Q9UGT4 822 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 FBXO40Q9UH90 709 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 ZNF214Q9UL59 606 aaPredicted RBP4.17□□□□□ -1.74
XRN1-209ENST00000472625 ZBED9Q6R2W3 1325 aa4.17□□□□□ -1.74
XRN1-209ENST00000472625 ATAD5Q96QE3 1844 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 XIRP2A4UGR9 3374 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 NPIPB6E9PJ23 425 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 RAB11FIP3O75154 756 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 CLEC3AO75596 197 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 CNMDO75829 334 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 CABYRO75952 493 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 TSPAN15O95858 294 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 SLC3A2P08195 630 aaKnown RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 FGRP09769 529 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 IMPDH2P12268 514 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 RAC2P15153 192 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 PDE6AP16499 860 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 GNAT2P19087 354 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 CYP2C19P33261 490 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 OAZ1P54368 228 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 GABPAQ06546 454 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 PPIGQ13427 754 aaKnown RBP eCLIP4.16□□□□□ -1.74
XRN1-209ENST00000472625 RRP1BQ14684 758 aaKnown RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 SEPT2Q15019 361 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 LRRC41Q15345 812 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 UBE3CQ15386 1083 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 RAB30Q15771 203 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 TRIM60Q495X7 471 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 FBLN7Q53RD9 439 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 ANKRD39Q53RE8 183 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 RTP2Q5QGT7 225 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 GIMAP6Q6P9H5 292 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 ZPBP2Q6X784 338 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 CCDC129Q6ZRS4 1044 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 LCNL1Q6ZST4 164 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 Q7L0L9 218 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 ANKRD33Q7Z3H0 272 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 RIOX2Q8IUF8 465 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 RPAP2Q8IXW5 612 aaPredicted RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 TMEM199Q8N511 208 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 C19orf47Q8N9M1 422 aaKnown RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 FBXO15Q8NCQ5 510 aaPredicted RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 TMEM52Q8NDY8 209 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 ENOX1Q8TC92 643 aaKnown RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 GUCD1Q96NT3 240 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 MPHOSPH6Q99547 160 aaKnown RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 EPB41L4BQ9H329 900 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 TRIT1Q9H3H1 467 aaKnown RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 DCP1AQ9NPI6 582 aaPredicted RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 PIH1D3Q9NQM4 214 aaKnown RBP4.16□□□□□ -1.74
XRN1-209ENST00000472625 STARD7Q9NQZ5 370 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 PDLIM7Q9NR12 457 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 BTBD7Q9P203 1132 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 PNMA2Q9UL42 364 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 KCNH3Q9ULD8 1083 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 DDX19BQ9UMR2 479 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 TMX2Q9Y320 296 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 ELP1O95163 1332 aa4.16□□□□□ -1.74
XRN1-209ENST00000472625 A0A0G2JMZ2 1700 aa4.15□□□□□ -1.74
XRN1-209ENST00000472625 LOC102724159A0A0B4J2E5 919 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 A0A0U1RQG5 324 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 HSFX4A0A1B0GTS1 333 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 HSFX3A0A1B0GWH4 333 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 A0A1W2PQ45 241 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 A0A1W2PQY0 241 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 GOLIM4O00461 696 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 ATP2A1O14983 1001 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 KIAA0355O15063 1070 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 ZEB2O60315 1214 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 PQBP1O60828 265 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 ZBED4O75132 1171 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 DUSP11O75319 330 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 ZFYP08048 801 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 PFKMP08237 780 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 CST5P28325 142 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 STAT3P40763 770 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 ADCYAP1R1P41586 468 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 NT5C2P49902 561 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 PLCD1P51178 756 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 DYNLL1P63167 89 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 RNF4P78317 190 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 AUHQ13825 339 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 PWP2Q15269 919 aaKnown RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 AAK1Q2M2I8 961 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 BRDTQ58F21 947 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 FAM47AQ5JRC9 791 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 GJC2Q5T442 439 aaPredicted RBP4.15□□□□□ -1.75
XRN1-209ENST00000472625 CEP85Q6P2H3 762 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 C16orf86Q6ZW13 317 aa4.15□□□□□ -1.75
XRN1-209ENST00000472625 PRPF38AQ8NAV1 312 aaKnown RBP4.15□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms