RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 C1orf186Q6ZWK4 172 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 THNSL1Q8IYQ7 743 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 SMG8Q8ND04 991 aaKnown RBP16.64■□□□□ 0.25
CALD1-215ENST00000472096 DEPTORQ8TB45 409 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 SPPL3Q8TCT6 385 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 FZD8Q9H461 694 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 NSUN3Q9H649 340 aaKnown RBP16.64■□□□□ 0.25
CALD1-215ENST00000472096 FBXO2Q9UK22 296 aaPredicted RBP16.64■□□□□ 0.25
CALD1-215ENST00000472096 IPPQ9Y573 584 aa16.64■□□□□ 0.25
CALD1-215ENST00000472096 FGF18O76093 207 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 CSPG5O95196 566 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 SSBP05455 408 aaKnown RBP eCLIP16.63■□□□□ 0.25
CALD1-215ENST00000472096 PRKCBP05771 671 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 GUCY2CP25092 1073 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 DNAJB1P25685 340 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 MARCKSP29966 332 aaPredicted RBP16.63■□□□□ 0.25
CALD1-215ENST00000472096 SLC12A3P55017 1021 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 CEBPZQ03701 1054 aaKnown RBP16.63■□□□□ 0.25
CALD1-215ENST00000472096 NCBP1Q09161 790 aaKnown RBP16.63■□□□□ 0.25
CALD1-215ENST00000472096 MAPK6Q16659 721 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 TCEAL5Q5H9L2 206 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 SYT2Q8N9I0 419 aaPredicted RBP16.63■□□□□ 0.25
CALD1-215ENST00000472096 CNNM3Q8NE01 707 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 LRRC15Q8TF66 581 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 CALML4Q96GE6 196 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 DRC1Q96MC2 740 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 ZNF558Q96NG5 402 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 TIPINQ9BVW5 301 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 RSAD1Q9HA92 442 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 TBC1D13Q9NVG8 400 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 INPP5FQ9Y2H2 1132 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 MORC2Q9Y6X9 1032 aaPredicted RBP16.63■□□□□ 0.25
CALD1-215ENST00000472096 CITO14578 2027 aa16.63■□□□□ 0.25
CALD1-215ENST00000472096 A0A1B0GUA9 196 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 OFD1O75665 1012 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 EDN1P05305 212 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 PLA2G4BP0C869 781 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 PLCG1P19174 1290 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 PPM1AP35813 382 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 PBX3P40426 434 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 NASPP49321 788 aaPredicted RBP16.62■□□□□ 0.25
CALD1-215ENST00000472096 UBE3AQ05086 875 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 KARSQ15046 597 aaKnown RBP16.62■□□□□ 0.25
CALD1-215ENST00000472096 NOMO2Q5JPE7 1267 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 SLC27A1Q6PCB7 646 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 KCNT2Q6UVM3 1135 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 CDR2LQ86X02 465 aaPredicted RBP16.62■□□□□ 0.25
CALD1-215ENST00000472096 POF1BQ8WVV4 589 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 ATXN2LQ8WWM7 1075 aaKnown RBP16.62■□□□□ 0.25
CALD1-215ENST00000472096 TRIM6Q9C030 488 aaPredicted RBP16.62■□□□□ 0.25
CALD1-215ENST00000472096 CCSER1Q9C0I3 900 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 NXF3Q9H4D5 531 aaKnown RBP16.62■□□□□ 0.25
CALD1-215ENST00000472096 BLOC1S4Q9NUP1 217 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 KCND2Q9NZV8 630 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 COG5Q9UP83 839 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 PDCD11Q14690 1871 aaKnown RBP16.62■□□□□ 0.25
CALD1-215ENST00000472096 PHLPP2Q6ZVD8 1323 aa16.62■□□□□ 0.25
CALD1-215ENST00000472096 ACKR2O00590 384 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 NPTXRO95502 500 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 ITGA4P13612 1032 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 PDIA4P13667 645 aaKnown RBP16.61■□□□□ 0.25
CALD1-215ENST00000472096 LIG1P18858 919 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 NPTX2P47972 431 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 EFNA5P52803 228 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 PEX3P56589 373 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 TFF2Q03403 129 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 DMP1Q13316 513 aaPredicted RBP16.61■□□□□ 0.25
CALD1-215ENST00000472096 PRPF4BQ13523 1007 aaKnown RBP16.61■□□□□ 0.25
CALD1-215ENST00000472096 RASSF8Q8NHQ8 419 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 URGCPQ8TCY9 931 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 HLA-CQ95604 372 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 PDZD7Q9H5P4 517 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 ARHGAP28Q9P2N2 729 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 HES2Q9Y543 173 aa16.61■□□□□ 0.25
CALD1-215ENST00000472096 SRPRBQ9Y5M8 271 aaKnown RBP16.61■□□□□ 0.25
CALD1-215ENST00000472096 TCHHQ07283 1943 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 CCDC169A6NNP5 214 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 N4BP3O15049 544 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 INPPL1O15357 1258 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 ZC3H11AO75152 810 aaKnown RBP eCLIP16.6■□□□□ 0.25
CALD1-215ENST00000472096 F13A1P00488 732 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 ZSCAN22P10073 491 aaPredicted RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 IRS1P35568 1242 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 BCAR1P56945 870 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 MRPS5P82675 430 aaKnown RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 PLCB3Q01970 1234 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 RAD51AP2Q09MP3 1159 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 SLC39A14Q15043 492 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 TJAP1Q5JTD0 557 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 SPECC1Q5M775 1068 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 USP49Q70CQ1 688 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 HACE1Q8IYU2 909 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 SLC39A11Q8N1S5 342 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 MRPS27Q92552 414 aaKnown RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 RAD54LQ92698 747 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 SYMPKQ92797 1274 aaKnown RBP16.6■□□□□ 0.25
CALD1-215ENST00000472096 EPSTI1Q96J88 318 aa16.6■□□□□ 0.25
CALD1-215ENST00000472096 CLIC6Q96NY7 704 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms