RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 NRP1O14786 923 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 OR52Z1P0C646 297 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 ARF4P18085 180 aaPredicted RBP25.01■■□□□ 1.59
C9orf3-213ENST00000471978 RBM25P49756 843 aaKnown RBP25.01■■□□□ 1.59
C9orf3-213ENST00000471978 ZXDAP98168 799 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 GNL2Q13823 731 aaKnown RBP25.01■■□□□ 1.59
C9orf3-213ENST00000471978 PTPN14Q15678 1187 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 ERMNQ8TAM6 284 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 NACC1Q96RE7 527 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 GAD1Q99259 594 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 KIF2CQ99661 725 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 POLR3CQ9BUI4 534 aaPredicted RBP25.01■■□□□ 1.59
C9orf3-213ENST00000471978 TRIM6Q9C030 488 aaPredicted RBP25.01■■□□□ 1.59
C9orf3-213ENST00000471978 GPRC5CQ9NQ84 441 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 SH2B1Q9NRF2 756 aaPredicted RBP25.01■■□□□ 1.59
C9orf3-213ENST00000471978 DZANK1Q9NVP4 752 aa25.01■■□□□ 1.59
C9orf3-213ENST00000471978 DBR1Q9UK59 544 aaKnown RBP25.01■■□□□ 1.59
C9orf3-213ENST00000471978 MUC6Q6W4X9 2439 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 B4GALT5O43286 388 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 SSBP05455 408 aaKnown RBP eCLIP25■■□□□ 1.59
C9orf3-213ENST00000471978 EPCAMP16422 314 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 SP100P23497 879 aaPredicted RBP25■■□□□ 1.59
C9orf3-213ENST00000471978 MLH1P40692 756 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 TRIM67Q6ZTA4 783 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 NOSTRINQ8IVI9 506 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 MCPH1Q8NEM0 835 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 MFSD14AQ96MC6 490 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 NECTIN4Q96NY8 510 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 APOL6Q9BWW8 343 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 TSHZ2Q9NRE2 1034 aa25■■□□□ 1.59
C9orf3-213ENST00000471978 LRRIQ4A6NIV6 560 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 INPPL1O15357 1258 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 TECTAO75443 2155 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 TTC38Q5R3I4 469 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 RARS2Q5T160 578 aaKnown RBP24.99■■□□□ 1.59
C9orf3-213ENST00000471978 POTEGQ6S5H5 508 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 COLGALT2Q8IYK4 626 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 HACE1Q8IYU2 909 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 C12orf76Q8N812 135 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-213ENST00000471978 SLC22A17Q8WUG5 538 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 ZFP42Q96MM3 310 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 EMILIN2Q9BXX0 1053 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 PRG3Q9Y2Y8 225 aaPredicted RBP24.99■■□□□ 1.59
C9orf3-213ENST00000471978 NR2E1Q9Y466 385 aa24.99■■□□□ 1.59
C9orf3-213ENST00000471978 TMEM221A6NGB7 291 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 M0R296 226 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 RPA1P27694 616 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 MTHFRP42898 656 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 OR1G1P47890 313 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 SCNN1GP51170 649 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 C8orf34Q49A92 452 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 SLC27A1Q6PCB7 646 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 PPFIBP1Q86W92 1011 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 CDR2LQ86X02 465 aaPredicted RBP24.98■■□□□ 1.59
C9orf3-213ENST00000471978 RIPOR3Q96MK2 946 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 NXF3Q9H4D5 531 aaKnown RBP24.98■■□□□ 1.59
C9orf3-213ENST00000471978 POMKQ9H5K3 350 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 MIOSQ9NXC5 875 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 GIT1Q9Y2X7 761 aa24.98■■□□□ 1.59
C9orf3-213ENST00000471978 A0A1B0GUA9 196 aa24.97■■□□□ 1.59
C9orf3-213ENST00000471978 NPTXRO95502 500 aa24.97■■□□□ 1.59
C9orf3-213ENST00000471978 WEE2P0C1S8 567 aa24.97■■□□□ 1.59
C9orf3-213ENST00000471978 TRAPPC10P48553 1259 aa24.97■■□□□ 1.59
C9orf3-213ENST00000471978 CABP7Q86V35 215 aa24.97■■□□□ 1.59
C9orf3-213ENST00000471978 KLHL5Q96PQ7 755 aa24.97■■□□□ 1.59
C9orf3-213ENST00000471978 MRPL17Q9NRX2 175 aaKnown RBP24.97■■□□□ 1.59
C9orf3-213ENST00000471978 MARCH5Q9NX47 278 aa24.97■■□□□ 1.59
C9orf3-213ENST00000471978 NOL7Q9UMY1 257 aaKnown RBP24.97■■□□□ 1.59
C9orf3-213ENST00000471978 ARHGEF35A5YM69 484 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 CNPP09543 421 aaKnown RBP24.96■■□□□ 1.59
C9orf3-213ENST00000471978 AKAP5P24588 427 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 KLRC2P26717 231 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 DSC1Q08554 894 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 PTPN21Q16825 1174 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 KANK3Q6NY19 840 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 PADI6Q6TGC4 694 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 ZBTB8OSQ8IWT0 167 aa24.96■■□□□ 1.59
C9orf3-213ENST00000471978 PRMT7Q9NVM4 692 aaPredicted RBP24.96■■□□□ 1.59
C9orf3-213ENST00000471978 C2CD2LO14523 706 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 LILRB3O75022 631 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 NR1I2O75469 434 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 SOD2P04179 222 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 URODP06132 367 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 NBR1Q14596 966 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 ATAT1Q5SQI0 421 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 HAUS3Q68CZ6 603 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 CDCA2Q69YH5 1023 aaPredicted RBP24.95■■□□□ 1.58
C9orf3-213ENST00000471978 PPP4R3CPQ6ZMV5 832 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 BMP8AQ7Z5Y6 402 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 ZBTB33Q86T24 672 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 C4orf32Q8N8J7 132 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 PBXIP1Q96AQ6 731 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 PRIMPOLQ96LW4 560 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 FBXL18Q96ME1 805 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 HERC2P3Q9BVR0 1158 aa24.95■■□□□ 1.58
C9orf3-213ENST00000471978 CYP11B2P19099 503 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 CLCN4P51793 760 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 SIGLEC14Q08ET2 396 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 KIAA1841Q6NSI8 718 aa24.94■■□□□ 1.58
C9orf3-213ENST00000471978 TAS1R1Q7RTX1 841 aa24.94■■□□□ 1.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms