RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 ICAM3P32942 547 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 HSPA9P38646 679 aaKnown RBP11.48□□□□□ -0.57
APLF-204ENST00000471727 GYS2P54840 703 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 DLG4P78352 724 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 MTMR3Q13615 1198 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 SUPT20HL1Q3ZLR7 823 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 TBC1D10BQ4KMP7 808 aaPredicted RBP11.48□□□□□ -0.57
APLF-204ENST00000471727 XKR3Q5GH77 459 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 SAMD7Q7Z3H4 446 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 EFCAB13Q8IY85 973 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 IQCKQ8N0W5 287 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 CHST13Q8NET6 341 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 DNERQ8NFT8 737 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 CASKIN2Q8WXE0 1202 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 IFT81Q8WYA0 676 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 SHC3Q92529 594 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 DHX38Q92620 1227 aaKnown RBP11.48□□□□□ -0.57
APLF-204ENST00000471727 RUNDC3BQ96NL0 473 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 NT5C1BQ96P26 610 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 WRNIP1Q96S55 665 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 ATP6V0A4Q9HBG4 840 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 JPH1Q9HDC5 661 aaPredicted RBP11.48□□□□□ -0.57
APLF-204ENST00000471727 PDLIM7Q9NR12 457 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 SEPT11Q9NVA2 429 aaKnown RBP11.48□□□□□ -0.57
APLF-204ENST00000471727 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.48□□□□□ -0.57
APLF-204ENST00000471727 GABBR1Q9UBS5 961 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 SLC9A2Q9UBY0 812 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 ZNF214Q9UL59 606 aaPredicted RBP11.48□□□□□ -0.57
APLF-204ENST00000471727 NFU1Q9UMS0 254 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 FER1L6Q2WGJ9 1857 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 IGSF9BQ9UPX0 1349 aa11.48□□□□□ -0.57
APLF-204ENST00000471727 FAM187AA6NFU0 413 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 SPATA31C2B4DYI2 1134 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 DDX3YO15523 660 aaKnown RBP11.47□□□□□ -0.57
APLF-204ENST00000471727 FTLP02792 175 aaPredicted RBP11.47□□□□□ -0.57
APLF-204ENST00000471727 GBP1P32455 592 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 HNRNPH2P55795 449 aaKnown RBP11.47□□□□□ -0.57
APLF-204ENST00000471727 SH3D19Q5HYK7 790 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 SPDYCQ5MJ68 293 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 DEFB132Q7Z7B7 95 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 CCDC125Q86Z20 511 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 ARHGEF19Q8IW93 802 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 KLHL7Q8IXQ5 586 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 RPUSD2Q8IZ73 545 aaKnown RBP11.47□□□□□ -0.57
APLF-204ENST00000471727 GPD1LQ8N335 351 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 FBXL13Q8NEE6 735 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 SEC14L1Q92503 715 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 GDAP1L1Q96MZ0 367 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 RAB17Q9H0T7 212 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 WNT8AQ9H1J5 351 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 CYP39A1Q9NYL5 469 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 FBXO40Q9UH90 709 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 UTP11Q9Y3A2 253 aaKnown RBP11.47□□□□□ -0.57
APLF-204ENST00000471727 PPME1Q9Y570 386 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 RIPK3Q9Y572 518 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 GJA3Q9Y6H8 435 aa11.47□□□□□ -0.57
APLF-204ENST00000471727 SHOX2O60902 331 aaPredicted RBP11.46□□□□□ -0.57
APLF-204ENST00000471727 LRRN2O75325 713 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 STBD1O95210 358 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 EGFRP00533 1210 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 ABCB4P21439 1286 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 ADSSP30520 456 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 BPIFB4P59827 614 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 DHX34Q14147 1143 aaKnown RBP11.46□□□□□ -0.57
APLF-204ENST00000471727 EMC10Q5UCC4 262 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 PPP1R2P3Q6NXS1 205 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 ABHD15Q6UXT9 468 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 ZNF677Q86XU0 584 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 POMGNT1Q8WZA1 660 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 THAP2Q9H0W7 228 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 OSGEPQ9NPF4 335 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 GPRC5CQ9NQ84 441 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 CYP26B1Q9NR63 512 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 RAB20Q9NX57 234 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 CTTNBP2NLQ9P2B4 639 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 UVRAGQ9P2Y5 699 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 SYNGAP1Q96PV0 1343 aa11.46□□□□□ -0.57
APLF-204ENST00000471727 ZNF233A6NK53 670 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ANKRD63C9JTQ0 380 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ERLIN2O94905 339 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ATG7O95352 703 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 LDHAP00338 332 aaKnown RBP11.46□□□□□ -0.58
APLF-204ENST00000471727 ADRB2P07550 413 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 SUPT20HL2P0C7V6 817 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 HMGCS2P54868 508 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 RNASE9P60153 205 aaKnown RBP11.46□□□□□ -0.58
APLF-204ENST00000471727 PTENP60484 403 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 ACTR2P61160 394 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 SKOR1P84550 965 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 GCNT1Q02742 428 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 CYP24A1Q07973 514 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 TMEM132BQ14DG7 1078 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 STXBP2Q15833 593 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 PLA2G4FQ68DD2 849 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 SLFN12LQ6IEE8 588 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 SWSAP1Q6NVH7 229 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 CBWD2Q8IUF1 395 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 PPM1KQ8N3J5 372 aa11.46□□□□□ -0.58
APLF-204ENST00000471727 TSEN2Q8NCE0 465 aaKnown RBP11.46□□□□□ -0.58
APLF-204ENST00000471727 PLEKHO2Q8TD55 490 aa11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms