RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 DGKHQ86XP1 1220 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 CIPCQ9C0C6 399 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 KLK14Q9P0G3 267 aa9.13□□□□□ -0.95
CD47-204ENST00000471694 TLL1O43897 1013 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 ALDH2P05091 517 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 PCSK1P29120 753 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 HIRAP54198 1017 aaPredicted RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 OCRLQ01968 901 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 SLC45A4Q5BKX6 768 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 NOL9Q5SY16 702 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 LRRC71Q8N4P6 559 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 MAGOHBQ96A72 148 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 DHX35Q9H5Z1 703 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 CHST12Q9NRB3 414 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 PLA2G4CQ9UP65 541 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 RNF17Q9BXT8 1623 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 NOLC1Q14978 699 aaKnown RBP eCLIP9.12□□□□□ -0.956e-6■□□□□ 10.9
CD47-204ENST00000471694 PDIA6Q15084 440 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 PTGISQ16647 500 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 OR6P1Q8NGX9 317 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 FAM20AQ96MK3 541 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 CPSF1Q10570 1443 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 SSH2Q76I76 1423 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 LRRC53A6NM62 1247 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 C21orf59P57076 290 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 SCRN1Q12765 414 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 NBPF20Q3BBV1 942 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 ITPRIPL1Q6GPH6 555 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 KRBA2Q6ZNG9 492 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 GPC2Q8N158 579 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 XXYLT1Q8NBI6 393 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 TUBGCP2Q9BSJ2 902 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 KRT82Q9NSB4 513 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 NAGPAQ9UK23 515 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 PRR36Q9H6K5 1346 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 TECPR2O15040 1411 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 CALB1P05937 261 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 HIST1H2AGP0C0S8 130 aaPredicted RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 HIST1H2ADP20671 130 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 GNA15P30679 374 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 MNAT1P51948 309 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 TRIP13Q15645 432 aaPredicted RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 CTXN3Q4LDR2 81 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 ENOX1Q8TC92 643 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 OSBP2Q969R2 916 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 DHTKD1Q96HY7 919 aaPredicted RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 HIST1H2AHQ96KK5 128 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 HIST1H2AJQ99878 128 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 H2AFJQ9BTM1 129 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 UBE2OQ9C0C9 1292 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 ADAM22Q9P0K1 906 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 A0A087WWV3 80 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 CCDC151A5D8V7 595 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 SART1O43290 800 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 APOA4P06727 396 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 TUBB2AQ13885 445 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 C10orf76Q5T2E6 689 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 FAM102AQ5T9C2 384 aaPredicted RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 TMED8Q6PL24 325 aaPredicted RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 RASSF3Q86WH2 238 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 ASAP3Q8TDY4 903 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 OTULINQ96BN8 352 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 CCDC124Q96CT7 223 aaKnown RBP9.12□□□□□ -0.95
CD47-204ENST00000471694 TUBB2BQ9BVA1 445 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 SLC28A3Q9HAS3 691 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 POLD4Q9HCU8 107 aa9.12□□□□□ -0.95
CD47-204ENST00000471694 OPLAHO14841 1288 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 CDC25AP30304 524 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 NLRP11P59045 1033 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 SGCGQ13326 291 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 C16orf72Q14CZ0 275 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 PHACTR4Q8IZ21 702 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 ATG4CQ96DT6 458 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 EIF2AK1Q9BQI3 630 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 EPC1Q9H2F5 836 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 PCDHB6Q9Y5E3 794 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 NCAPD2Q15021 1401 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 H7C1W4 665 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 ASAP2O43150 1006 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 GCLMP48507 274 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 KHDRBS2Q5VWX1 349 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 CHSY1Q86X52 802 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 ZFP42Q96MM3 310 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 CDHR2Q9BYE9 1310 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 CTNNA1P35221 906 aaKnown RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 SLC11A2P49281 568 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 POLD3Q15054 466 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 SFR1Q86XK3 245 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 FBXO16Q8IX29 292 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 SLC7A14Q8TBB6 771 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 HASPINQ8TF76 798 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 RIN2Q8WYP3 895 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 RAPGEF5Q92565 580 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 SPACA7Q96KW9 195 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 CYP4F11Q9HBI6 524 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 DCP1AQ9NPI6 582 aaPredicted RBP9.11□□□□□ -0.95
CD47-204ENST00000471694 PCSK1NQ9UHG2 260 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 MEI4A8MW99 385 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 RNF40O75150 1001 aa9.11□□□□□ -0.95
CD47-204ENST00000471694 MMP1P03956 469 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms