RNA–Protein interactions for RNA: ENST00000471655.1

VPS8-221, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 434 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-221ENST00000471655 DNAJB4Q9UDY4 337 aa16.59■□□□□ 0.25
VPS8-221ENST00000471655 GIT1Q9Y2X7 761 aa16.59■□□□□ 0.25
VPS8-221ENST00000471655 ZMYM2Q9UBW7 1377 aa16.59■□□□□ 0.25
VPS8-221ENST00000471655 LRRIQ4A6NIV6 560 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 CD2BP2O95400 341 aaKnown RBP16.58■□□□□ 0.24
VPS8-221ENST00000471655 CXCL14O95715 111 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 CCT6AP40227 531 aaKnown RBP16.58■□□□□ 0.24
VPS8-221ENST00000471655 AFF1P51825 1210 aaKnown RBP16.58■□□□□ 0.24
VPS8-221ENST00000471655 RBM10P98175 930 aaKnown RBP16.58■□□□□ 0.24
VPS8-221ENST00000471655 ECM1Q16610 540 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 TMEM31Q5JXX7 168 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 ANKRD54Q6NXT1 300 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 SLC27A1Q6PCB7 646 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 MAEAQ7L5Y9 396 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 ZBTB8OSQ8IWT0 167 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 HACE1Q8IYU2 909 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 CASP10Q92851 521 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 FAM193BQ96PV7 902 aaPredicted RBP16.58■□□□□ 0.24
VPS8-221ENST00000471655 S1PR5Q9H228 398 aa16.58■□□□□ 0.24
VPS8-221ENST00000471655 USP15Q9Y4E8 981 aaPredicted RBP16.58■□□□□ 0.24
VPS8-221ENST00000471655 ARL5CA6NH57 179 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 B4GALT5O43286 388 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 B4GALT3O60512 393 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 CLASP2O75122 1294 aaKnown RBP16.57■□□□□ 0.24
VPS8-221ENST00000471655 COL9A1P20849 921 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 GJB2P29033 226 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 NAMPTP43490 491 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 PPP2R5AQ15172 486 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 SYCE2Q6PIF2 218 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 BCL7CQ8WUZ0 217 aaPredicted RBP16.57■□□□□ 0.24
VPS8-221ENST00000471655 LRFN3Q9BTN0 628 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 TRIM6Q9C030 488 aaPredicted RBP16.57■□□□□ 0.24
VPS8-221ENST00000471655 GBP3Q9H0R5 595 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 RNF39Q9H2S5 420 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 KIAA1024Q9UPX6 916 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 FAN1Q9Y2M0 1017 aa16.57■□□□□ 0.24
VPS8-221ENST00000471655 LOC730098B7Z3J9 87 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 NRP1O14786 923 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 DCXO43602 365 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 POMCP01189 267 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 DSC1Q08554 894 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 CBX2Q14781 532 aaPredicted RBP16.56■□□□□ 0.24
VPS8-221ENST00000471655 DTHD1Q6ZMT9 781 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 COLGALT2Q8IYK4 626 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 KCTD17Q8N5Z5 321 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 SNX29Q8TEQ0 813 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 KIFAP3Q92845 792 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 GAD1Q99259 594 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 PHF7Q9BWX1 381 aaPredicted RBP16.56■□□□□ 0.24
VPS8-221ENST00000471655 VN1R3Q9BXE9 311 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 BHMT2Q9H2M3 363 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 C11orf16Q9NQ32 467 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 HES2Q9Y543 173 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.56■□□□□ 0.24
VPS8-221ENST00000471655 HCFC2Q9Y5Z7 792 aa16.56■□□□□ 0.24
VPS8-221ENST00000471655 EFEMP2O95967 443 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 MLH1P40692 756 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 EFNA5P52803 228 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 ATP2C1P98194 919 aaPredicted RBP16.55■□□□□ 0.24
VPS8-221ENST00000471655 IL17AQ16552 155 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 MAPK6Q16659 721 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 TPRNQ4KMQ1 711 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 KRT79Q5XKE5 535 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 MCTP1Q6DN14 999 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 GSTCDQ8NEC7 633 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 BSNDQ8WZ55 320 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 CCDC113Q9H0I3 377 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 NXF3Q9H4D5 531 aaKnown RBP16.55■□□□□ 0.24
VPS8-221ENST00000471655 DDX19AQ9NUU7 478 aaKnown RBP16.55■□□□□ 0.24
VPS8-221ENST00000471655 MIOSQ9NXC5 875 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 DNM3Q9UQ16 869 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 SMC3Q9UQE7 1217 aa16.55■□□□□ 0.24
VPS8-221ENST00000471655 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.54■□□□□ 0.24
VPS8-221ENST00000471655 H3BQV1 296 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 ACKR2O00590 384 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 N4BP3O15049 544 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 LILRB3O75022 631 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 NPTXRO95502 500 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 ITIH3Q06033 890 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 PTPN14Q15678 1187 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 HERC4Q5GLZ8 1057 aaPredicted RBP16.54■□□□□ 0.24
VPS8-221ENST00000471655 ARL6IP4Q66PJ3 421 aaKnown RBP16.54■□□□□ 0.24
VPS8-221ENST00000471655 LLGL2Q6P1M3 1020 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 PPFIBP1Q86W92 1011 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 RNF135Q8IUD6 432 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 DEPTORQ8TB45 409 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 SLC22A17Q8WUG5 538 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 IFT74Q96LB3 600 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 ZFP42Q96MM3 310 aa16.54■□□□□ 0.24
VPS8-221ENST00000471655 PRR33A8MZF0 331 aa16.53■□□□□ 0.24
VPS8-221ENST00000471655 NR1I2O75469 434 aa16.53■□□□□ 0.24
VPS8-221ENST00000471655 SOD2P04179 222 aa16.53■□□□□ 0.24
VPS8-221ENST00000471655 PRKCBP05771 671 aa16.53■□□□□ 0.24
VPS8-221ENST00000471655 SCNN1GP51170 649 aa16.53■□□□□ 0.24
VPS8-221ENST00000471655 PRPF4BQ13523 1007 aaKnown RBP16.53■□□□□ 0.24
VPS8-221ENST00000471655 HYIQ5T013 277 aa16.53■□□□□ 0.24
VPS8-221ENST00000471655 CDR2LQ86X02 465 aaPredicted RBP16.53■□□□□ 0.24
VPS8-221ENST00000471655 RNF168Q8IYW5 571 aaPredicted RBP16.53■□□□□ 0.24
VPS8-221ENST00000471655 TMEM87AQ8NBN3 555 aa16.53■□□□□ 0.24
VPS8-221ENST00000471655 AUTS2Q8WXX7 1259 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms