RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 TCHHQ07283 1943 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 FAM237AA0A1B0GTK4 181 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 A0A1W2PQ27 194 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 A0A1W2PQ64 194 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 A0A1W2PQD8 194 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 TTLL13PA6NNM8 815 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 C5orf67F2Z3F1 127 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 ITGA4P13612 1032 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 GAP43P17677 238 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 STRN3Q13033 797 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 ATF7IP2Q5U623 682 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 AGMOQ6ZNB7 445 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 TAS1R3Q7RTX0 852 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 HAUS6Q7Z4H7 955 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 APBB1IPQ7Z5R6 666 aaPredicted RBP16.81■□□□□ 0.28
SDC3-203ENST00000471567 SPRED2Q7Z698 418 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 LRRC43Q8N309 656 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 FBXO22Q8NEZ5 403 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 HELQQ8TDG4 1101 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 MYLIPQ8WY64 445 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 LPPQ93052 612 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 MRPL9Q9BYD2 267 aaKnown RBP16.81■□□□□ 0.28
SDC3-203ENST00000471567 ZHX3Q9H4I2 956 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 AAASQ9NRG9 546 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 TYW1Q9NV66 732 aaKnown RBP16.81■□□□□ 0.28
SDC3-203ENST00000471567 USP25Q9UHP3 1055 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 TNFSF13BQ9Y275 285 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 STXBP5LQ9Y2K9 1186 aa16.81■□□□□ 0.28
SDC3-203ENST00000471567 CHD9Q3L8U1 2897 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 FNDC1Q4ZHG4 1894 aaPredicted RBP16.8■□□□□ 0.28
SDC3-203ENST00000471567 EPOPA6NHQ4 379 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 OFD1O75665 1012 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 NPTXRO95502 500 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 EDN1P05305 212 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 POU3F3P20264 500 aaPredicted RBP16.8■□□□□ 0.28
SDC3-203ENST00000471567 DCAF4L1Q3SXM0 396 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 CNNM4Q6P4Q7 775 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 CDR2LQ86X02 465 aaPredicted RBP16.8■□□□□ 0.28
SDC3-203ENST00000471567 FAM178BQ8IXR5 827 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 FIZ1Q96SL8 496 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 ACO2Q99798 780 aaKnown RBP16.8■□□□□ 0.28
SDC3-203ENST00000471567 ST6GALNAC4Q9H4F1 302 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 RSAD1Q9HA92 442 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 CHMP5Q9NZZ3 219 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 MTUS1Q9ULD2 1270 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 HPSEQ9Y251 543 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 GIT1Q9Y2X7 761 aa16.8■□□□□ 0.28
SDC3-203ENST00000471567 ZMYM2Q9UBW7 1377 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 FRMD3A2A2Y4 597 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 CARNS1A5YM72 827 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 MEIS3P2A8K0S8 358 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 H3BNC9 293 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 K7ENM7 598 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 INPPL1O15357 1258 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 SLFN14P0C7P3 912 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 FOSL2P15408 326 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 PFKFB1P16118 471 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 LAG3P18627 525 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 CTNNB1P35222 781 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 CSPP1Q1MSJ5 1256 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 NOMO2Q5JPE7 1267 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 ZPBP2Q6X784 338 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 LRRC55Q6ZSA7 311 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 CEP57L1Q8IYX8 460 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 P2RX5Q93086 422 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 C11orf84Q9BUA3 381 aaPredicted RBP16.79■□□□□ 0.28
SDC3-203ENST00000471567 TARS2Q9BW92 718 aaKnown RBP16.79■□□□□ 0.28
SDC3-203ENST00000471567 TRIM9Q9C026 710 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 CWH43Q9H720 699 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 GDPD2Q9HCC8 539 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 PTPRHQ9HD43 1115 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 LMCD1Q9NZU5 365 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 KANSL3Q9P2N6 904 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 USP20Q9Y2K6 914 aa16.79■□□□□ 0.28
SDC3-203ENST00000471567 RALGAPA2Q2PPJ7 1873 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 A0A1B0GVL5 298 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 RFXAPO00287 272 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 LPXNO60711 386 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 IDEP14735 1019 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 GTF2BQ00403 316 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 ADGRE1Q14246 886 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 LONRF3Q496Y0 759 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 SPOUT1Q5T280 376 aaKnown RBP16.78■□□□□ 0.28
SDC3-203ENST00000471567 EEF1DP3Q658K8 133 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 ZNF720Q7Z2F6 126 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 SFR1Q86XK3 245 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 CCDC65Q8IXS2 484 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 URGCPQ8TCY9 931 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 RNF39Q9H2S5 420 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 NXF3Q9H4D5 531 aaKnown RBP16.78■□□□□ 0.28
SDC3-203ENST00000471567 OLFML3Q9NRN5 406 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 PANK4Q9NVE7 773 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 TBX20Q9UMR3 447 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 HES2Q9Y543 173 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 PCDHB12Q9Y5F1 795 aa16.78■□□□□ 0.28
SDC3-203ENST00000471567 GTPBP6O43824 516 aaPredicted RBP16.77■□□□□ 0.28
SDC3-203ENST00000471567 TOM1L1O75674 476 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 SLC34A2O95436 690 aa16.77■□□□□ 0.28
SDC3-203ENST00000471567 PIGRP01833 764 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms