RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 NFATC3Q12968 1075 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 PLS1Q14651 629 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 SKIDA1Q1XH10 827 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 VASNQ6EMK4 673 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 BMP8AQ7Z5Y6 402 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 SAPCD2Q86UD0 394 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 FAM129CQ86XR2 697 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 LILRA2Q8N149 483 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 FAM26EQ8N5C1 309 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 SH2D3CQ8N5H7 860 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 MYCT1Q8N699 235 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 GPR156Q8NFN8 814 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 OR5AN1Q8NGI8 311 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 ZSCAN18Q8TBC5 510 aaPredicted RBP8.08□□□□□ -1.12
SMC5-202ENST00000471372 ANKS1AQ92625 1134 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 HOXB13Q92826 284 aaPredicted RBP8.08□□□□□ -1.12
SMC5-202ENST00000471372 CCDC120Q96HB5 630 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 CLPTM1LQ96KA5 538 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 KIAA1586Q9HCI6 787 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 ZFP64Q9NPA5 681 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 STARD7Q9NQZ5 370 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 PLA2G2DQ9UNK4 145 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 PCDHGB2Q9Y5G2 931 aa8.08□□□□□ -1.12
SMC5-202ENST00000471372 A0A087WV62 115 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 FAM171A2A8MVW0 826 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 PHGDHO43175 533 aaKnown RBP8.07□□□□□ -1.12
SMC5-202ENST00000471372 SLC26A4O43511 780 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 NRP2O60462 931 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 CUTAO60888 179 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 RPLP2P05387 115 aaKnown RBP8.07□□□□□ -1.12
SMC5-202ENST00000471372 KITP10721 976 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 TSHRP16473 764 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 NRG3P56975 720 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 ERVFRD-1P60508 538 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 IL13RA1P78552 427 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 NR1I3Q14994 352 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 ARTNQ5T4W7 220 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 PHF19Q5T6S3 580 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 KANK2Q63ZY3 851 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 CCDC70Q6NSX1 233 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 SLC23A3Q6PIS1 610 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 ETV3LQ6ZN32 361 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 HEATR3Q7Z4Q2 680 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 C3orf20Q8ND61 904 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.07□□□□□ -1.12
SMC5-202ENST00000471372 SAMD11Q96NU1 681 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 HAPLN2Q9GZV7 340 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 LMBRD1Q9NUN5 540 aa8.07□□□□□ -1.12
SMC5-202ENST00000471372 hCG_1642624A0A1W2PR95 340 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 F8W8V4 182 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 SGTAO43765 313 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 AKR1B10O60218 316 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 MED26O95402 600 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 SYN1P17600 705 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 GDNFP39905 211 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 GRK6P43250 576 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 SLC6A9P48067 706 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 MAPK10P53779 464 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 TARDBPQ13148 414 aaKnown RBP eCLIP8.06□□□□□ -1.12
SMC5-202ENST00000471372 RAB3GAP1Q15042 981 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 HIBCHQ6NVY1 386 aaPredicted RBP8.06□□□□□ -1.12
SMC5-202ENST00000471372 TMC6Q7Z403 805 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 AMIGO3Q86WK7 504 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 CELF5Q8N6W0 485 aaKnown RBP8.06□□□□□ -1.12
SMC5-202ENST00000471372 SPATA5Q8NB90 893 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 MYLIPQ8WY64 445 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 VRK1Q99986 396 aaPredicted RBP8.06□□□□□ -1.12
SMC5-202ENST00000471372 TDP1Q9NUW8 608 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 ABCF2Q9UG63 623 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 SIK3Q9Y2K2 1263 aa8.06□□□□□ -1.12
SMC5-202ENST00000471372 A0A1W2PPL8 197 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 N4BP3O15049 544 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 TLR5O60602 858 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 PAPLNO95428 1278 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 MPOP05164 745 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 SRGNP10124 158 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 TYRP14679 529 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 CTSSP25774 331 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 ADSLP30566 484 aaPredicted RBP8.05□□□□□ -1.12
SMC5-202ENST00000471372 GLRBP48167 497 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 CDC42EP1Q00587 391 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 CD83Q01151 205 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 FMO1Q01740 532 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 CD69Q07108 199 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 STILQ15468 1287 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 PLEKHN1Q494U1 663 aaPredicted RBP8.05□□□□□ -1.12
SMC5-202ENST00000471372 KHDC1Q4VXA5 237 aaKnown RBP8.05□□□□□ -1.12
SMC5-202ENST00000471372 CIAPIN1Q6FI81 312 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 TLDC1Q6P9B6 456 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 CCDC33Q8N5R6 958 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 WDR48Q8TAF3 677 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 MTFMTQ96DP5 389 aaKnown RBP8.05□□□□□ -1.12
SMC5-202ENST00000471372 DYDC2Q96IM9 177 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 MRGPRX4Q96LA9 322 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 SENP7Q9BQF6 1050 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 TACO1Q9BSH4 297 aaKnown RBP8.05□□□□□ -1.12
SMC5-202ENST00000471372 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 RNF32Q9H0A6 362 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 AS3MTQ9HBK9 375 aa8.05□□□□□ -1.12
SMC5-202ENST00000471372 ZNF287Q9HBT7 754 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms