RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 IL17AQ16552 155 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 KANK3Q6NY19 840 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 DDX53Q86TM3 631 aaKnown RBP17.03■□□□□ 0.32
COL1A1-203ENST00000471344 TMX3Q96JJ7 454 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 NACC1Q96RE7 527 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 POP1Q99575 1024 aaKnown RBP17.03■□□□□ 0.32
COL1A1-203ENST00000471344 NFKBIZQ9BYH8 718 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 MARCH5Q9NX47 278 aa17.03■□□□□ 0.32
COL1A1-203ENST00000471344 TDRD15B5MCY1 1934 aaKnown RBP17.03■□□□□ 0.32
COL1A1-203ENST00000471344 LOC730098B7Z3J9 87 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 NRP1O14786 923 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 NPTXRO95502 500 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 WEE2P0C1S8 567 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 CTSAP10619 480 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 EPCAMP16422 314 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 AKAP5P24588 427 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 AXLP30530 894 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 CCT6AP40227 531 aaKnown RBP17.02■□□□□ 0.32
COL1A1-203ENST00000471344 TRAPPC10P48553 1259 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 FXR2P51116 673 aaKnown RBP eCLIP17.02■□□□□ 0.32
COL1A1-203ENST00000471344 PTGDRQ13258 359 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 CDCA2Q69YH5 1023 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-203ENST00000471344 PADI6Q6TGC4 694 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 C12orf76Q8N812 135 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-203ENST00000471344 ERMNQ8TAM6 284 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 RPGRIP1Q96KN7 1286 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 KIFC3Q9BVG8 833 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 CACNG4Q9UBN1 327 aa17.02■□□□□ 0.32
COL1A1-203ENST00000471344 NOL7Q9UMY1 257 aaKnown RBP17.02■□□□□ 0.32
COL1A1-203ENST00000471344 PRG3Q9Y2Y8 225 aaPredicted RBP17.02■□□□□ 0.32
COL1A1-203ENST00000471344 ARHGEF35A5YM69 484 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 ALADP13716 330 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 CDC25AP30304 524 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 PCBP1Q15365 356 aaKnown RBP eCLIP17.01■□□□□ 0.31
COL1A1-203ENST00000471344 PTPN14Q15678 1187 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 TAS1R1Q7RTX1 841 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 COLGALT2Q8IYK4 626 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 MCPH1Q8NEM0 835 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 RSPH1Q8WYR4 309 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 PHF7Q9BWX1 381 aaPredicted RBP17.01■□□□□ 0.31
COL1A1-203ENST00000471344 KLK14Q9P0G3 267 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 LRWD1Q9UFC0 647 aa17.01■□□□□ 0.31
COL1A1-203ENST00000471344 FSD2A1L4K1 749 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 INPPL1O15357 1258 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 ST18O60284 1047 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 LIG1P18858 919 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 CYP11B2P19099 503 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 DSC1Q08554 894 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 CBX2Q14781 532 aaPredicted RBP17■□□□□ 0.31
COL1A1-203ENST00000471344 MCTP1Q6DN14 999 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 SLC27A1Q6PCB7 646 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 IGSF22Q8N9C0 903 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 GSTCDQ8NEC7 633 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 SNX29Q8TEQ0 813 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 RABGGTAQ92696 567 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 FAM193BQ96PV7 902 aaPredicted RBP17■□□□□ 0.31
COL1A1-203ENST00000471344 TRIM6Q9C030 488 aaPredicted RBP17■□□□□ 0.31
COL1A1-203ENST00000471344 CXCL16Q9H2A7 254 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 BHMT2Q9H2M3 363 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 DDX19AQ9NUU7 478 aaKnown RBP17■□□□□ 0.31
COL1A1-203ENST00000471344 KIAA1024Q9UPX6 916 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 FAN1Q9Y2M0 1017 aa17■□□□□ 0.31
COL1A1-203ENST00000471344 A0A1B0GUA9 196 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 C2CD2LO14523 706 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 SRGAP2BP0DMP2 458 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 GJB2P29033 226 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 OR1G1P47890 313 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 HERC4Q5GLZ8 1057 aaPredicted RBP16.99■□□□□ 0.31
COL1A1-203ENST00000471344 RARS2Q5T160 578 aaKnown RBP16.99■□□□□ 0.31
COL1A1-203ENST00000471344 HAUS3Q68CZ6 603 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 PPP4R3CPQ6ZMV5 832 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 KCNK18Q7Z418 384 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 CNNM3Q8NE01 707 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 SLC22A17Q8WUG5 538 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 CASP10Q92851 521 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 TMEM175Q9BSA9 504 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 CCDC113Q9H0I3 377 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 FZD8Q9H461 694 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 PDZD7Q9H5P4 517 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.99■□□□□ 0.31
COL1A1-203ENST00000471344 KANSL3Q9P2N6 904 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 IRAK3Q9Y616 596 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 PLXNA3P51805 1871 aa16.99■□□□□ 0.31
COL1A1-203ENST00000471344 PRR33A8MZF0 331 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 E9PMD0 336 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 ALDH2P05091 517 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 NCBP1Q09161 790 aaKnown RBP16.98■□□□□ 0.31
COL1A1-203ENST00000471344 EEF1DP3Q658K8 133 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 ZBTB8OSQ8IWT0 167 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 B3GALT6Q96L58 329 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 TBC1D32Q96NH3 1257 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 MMTAG2Q9BU76 263 aaKnown RBP16.98■□□□□ 0.31
COL1A1-203ENST00000471344 POMKQ9H5K3 350 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 UBN1Q9NPG3 1134 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 PRMT7Q9NVM4 692 aaPredicted RBP16.98■□□□□ 0.31
COL1A1-203ENST00000471344 PARP2Q9UGN5 583 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 TECTAO75443 2155 aa16.98■□□□□ 0.31
COL1A1-203ENST00000471344 LILRB3O75022 631 aa16.97■□□□□ 0.31
COL1A1-203ENST00000471344 EFEMP2O95967 443 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms