RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 VN1R2Q8NFZ6 395 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 SUSD6Q92537 303 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 LRFN3Q9BTN0 628 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 PHF7Q9BWX1 381 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-211ENST00000471260 TRIM6Q9C030 488 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-211ENST00000471260 ZBP1Q9H171 429 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 C2orf40Q9H1Z8 148 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 PRMT7Q9NVM4 692 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-211ENST00000471260 LRWD1Q9UFC0 647 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 FAN1Q9Y2M0 1017 aa14.95□□□□□ -0.02
HMGN1-211ENST00000471260 USP15Q9Y4E8 981 aaPredicted RBP14.95□□□□□ -0.02
HMGN1-211ENST00000471260 ARHGEF35A5YM69 484 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 DDHD2O94830 711 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 CXCL14O95715 111 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 DDIT3P35638 169 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 PRPHP41219 470 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 SLC11A1P49279 550 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 TOB1P50616 345 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-211ENST00000471260 PTGDRQ13258 359 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 PPP2R5AQ15172 486 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 TPRNQ4KMQ1 711 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 RILPL1Q5EBL4 403 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 CDCA2Q69YH5 1023 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-211ENST00000471260 SLC27A1Q6PCB7 646 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 POTEGQ6S5H5 508 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 PADI6Q6TGC4 694 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 ZBTB8OSQ8IWT0 167 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 IGSF22Q8N9C0 903 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 TMEM87AQ8NBN3 555 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 CPB2Q96IY4 423 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 TMX3Q96JJ7 454 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 EIF2AQ9BY44 585 aaKnown RBP14.94□□□□□ -0.02
HMGN1-211ENST00000471260 S1PR5Q9H228 398 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 FZD8Q9H461 694 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 DNAJB4Q9UDY4 337 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 ARIH1Q9Y4X5 557 aaPredicted RBP14.94□□□□□ -0.02
HMGN1-211ENST00000471260 HCFC2Q9Y5Z7 792 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 ZMYM2Q9UBW7 1377 aa14.94□□□□□ -0.02
HMGN1-211ENST00000471260 A0A087WWV3 80 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 ARL5CA6NH57 179 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 LRRIQ4A6NIV6 560 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 PRR33A8MZF0 331 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 LOC730098B7Z3J9 87 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 CLASP2O75122 1294 aaKnown RBP14.93□□□□□ -0.02
HMGN1-211ENST00000471260 CCT6AP40227 531 aaKnown RBP14.93□□□□□ -0.02
HMGN1-211ENST00000471260 NAMPTP43490 491 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 ITIH3Q06033 890 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 CBX2Q14781 532 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-211ENST00000471260 MAEAQ7L5Y9 396 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 PPFIBP1Q86W92 1011 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 TMEM173Q86WV6 379 aaPredicted RBP14.93□□□□□ -0.02
HMGN1-211ENST00000471260 KCTD17Q8N5Z5 321 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 GBP3Q9H0R5 595 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 GPRC5CQ9NQ84 441 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 SSX2IPQ9Y2D8 614 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 PCDHB6Q9Y5E3 794 aa14.93□□□□□ -0.02
HMGN1-211ENST00000471260 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-211ENST00000471260 NRP1O14786 923 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 NR1I2O75469 434 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 POMCP01189 267 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 MCM4P33991 863 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 AFF1P51825 1210 aaKnown RBP14.92□□□□□ -0.02
HMGN1-211ENST00000471260 RBM10P98175 930 aaKnown RBP14.92□□□□□ -0.02
HMGN1-211ENST00000471260 MAPK6Q16659 721 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 HERC4Q5GLZ8 1057 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-211ENST00000471260 SYCE2Q6PIF2 218 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 DTHD1Q6ZMT9 781 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 COLGALT2Q8IYK4 626 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 KIFAP3Q92845 792 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 C11orf16Q9NQ32 467 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.92□□□□□ -0.02
HMGN1-211ENST00000471260 KIAA1024Q9UPX6 916 aa14.92□□□□□ -0.02
HMGN1-211ENST00000471260 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.92□□□□□ -0.02
HMGN1-211ENST00000471260 B4GALT5O43286 388 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 CA8P35219 290 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 EFNA5P52803 228 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 DSC1Q08554 894 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 KRT79Q5XKE5 535 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 CES5AQ6NT32 575 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 LLGL2Q6P1M3 1020 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 RNF135Q8IUD6 432 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 SNX29Q8TEQ0 813 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 IFT74Q96LB3 600 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 NECTIN4Q96NY8 510 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 GAD1Q99259 594 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 EMILIN2Q9BXX0 1053 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 RNF39Q9H2S5 420 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 ADAM7Q9H2U9 754 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 DZANK1Q9NVP4 752 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 DNM3Q9UQ16 869 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 HES2Q9Y543 173 aa14.91□□□□□ -0.02
HMGN1-211ENST00000471260 H3BQV1 296 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 ACKR2O00590 384 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 N4BP3O15049 544 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 B4GALT3O60512 393 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 SOD2P04179 222 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 GJB2P29033 226 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 MLH1P40692 756 aa14.9□□□□□ -0.02
HMGN1-211ENST00000471260 PRPF4BQ13523 1007 aaKnown RBP14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms