RNA–Protein interactions for RNA: ENST00000471226.5

ABCF3-208, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 5

Gene ABCF3, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-208ENST00000471226 N4BP3O15049 544 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 SLC16A4O15374 487 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 GTPBP6O43824 516 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-208ENST00000471226 STAT6P42226 847 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 SMTNP53814 917 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 NCKAP1LP55160 1127 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 NUCB2P80303 420 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 E2F4Q16254 413 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 GLB1LQ6UWU2 654 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 SV2BQ7L1I2 683 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 TMEM161BQ8NDZ6 487 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 LEO1Q8WVC0 666 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-208ENST00000471226 C11orf84Q9BUA3 381 aaPredicted RBP16.71■□□□□ 0.27
ABCF3-208ENST00000471226 MRPL9Q9BYD2 267 aaKnown RBP16.71■□□□□ 0.27
ABCF3-208ENST00000471226 RNF39Q9H2S5 420 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 RSAD1Q9HA92 442 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 USP20Q9Y2K6 914 aa16.71■□□□□ 0.27
ABCF3-208ENST00000471226 EYSQ5T1H1 3165 aa16.71■□□□□ 0.26
ABCF3-208ENST00000471226 MYMKA6NI61 221 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 INPPL1O15357 1258 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 NPTXRO95502 500 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 KRT18P05783 430 aaKnown RBP16.7■□□□□ 0.26
ABCF3-208ENST00000471226 ITGA4P13612 1032 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 LIG1P18858 919 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 NOMO2Q5JPE7 1267 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 RESP18Q5W5W9 173 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 EEF1DP3Q658K8 133 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 PDILTQ8N807 584 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 COLGALT1Q8NBJ5 622 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 TRIM6Q9C030 488 aaPredicted RBP16.7■□□□□ 0.26
ABCF3-208ENST00000471226 PARVGQ9HBI0 331 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 UBN1Q9NPG3 1134 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 AAASQ9NRG9 546 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 PLAGL2Q9UPG8 496 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 TNFSF13BQ9Y275 285 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 HES2Q9Y543 173 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 CITO14578 2027 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 REV3LO60673 3130 aa16.7■□□□□ 0.26
ABCF3-208ENST00000471226 FAM13AO94988 1023 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 MAPTP10636 758 aaKnown RBP16.69■□□□□ 0.26
ABCF3-208ENST00000471226 LAG3P18627 525 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 SPOUT1Q5T280 376 aaKnown RBP16.69■□□□□ 0.26
ABCF3-208ENST00000471226 ATF7IP2Q5U623 682 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 MYCT1Q8N699 235 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 KLHL23Q8NBE8 558 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 DDX12PQ92771 950 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 DNAJC19Q96DA6 116 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 SPATA32Q96LK8 384 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 FIZ1Q96SL8 496 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 ACO2Q99798 780 aaKnown RBP16.69■□□□□ 0.26
ABCF3-208ENST00000471226 MRPL4Q9BYD3 311 aaKnown RBP16.69■□□□□ 0.26
ABCF3-208ENST00000471226 LMAN2LQ9H0V9 348 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 CUEDC2Q9H467 287 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 NXF3Q9H4D5 531 aaKnown RBP16.69■□□□□ 0.26
ABCF3-208ENST00000471226 PTPRHQ9HD43 1115 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 TBC1D13Q9NVG8 400 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 PCDHB12Q9Y5F1 795 aa16.69■□□□□ 0.26
ABCF3-208ENST00000471226 ZMYM2Q9UBW7 1377 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 H0YCG3 227 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 GRM6O15303 877 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 TRAK2O60296 914 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 ITGB1P05556 798 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 SCP2P22307 547 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 AFF1P51825 1210 aaKnown RBP16.68■□□□□ 0.26
ABCF3-208ENST00000471226 CSPP1Q1MSJ5 1256 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 TMEM132AQ24JP5 1023 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 ADALQ6DHV7 355 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 KCNT2Q6UVM3 1135 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 DYMQ7RTS9 669 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 HAUS6Q7Z4H7 955 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 HACE1Q8IYU2 909 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 SPPL3Q8TCT6 385 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 MRPL38Q96DV4 380 aaKnown RBP16.68■□□□□ 0.26
ABCF3-208ENST00000471226 ADPGKQ9BRR6 497 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 TARS2Q9BW92 718 aaKnown RBP16.68■□□□□ 0.26
ABCF3-208ENST00000471226 SCAND2PQ9GZW5 306 aaPredicted RBP16.68■□□□□ 0.26
ABCF3-208ENST00000471226 KANSL3Q9P2N6 904 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 INPP5FQ9Y2H2 1132 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 GIT1Q9Y2X7 761 aa16.68■□□□□ 0.26
ABCF3-208ENST00000471226 BRWD1Q9NSI6 2320 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 TBCAO75347 108 aaKnown RBP16.67■□□□□ 0.26
ABCF3-208ENST00000471226 PROZP22891 400 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 CAMK1Q14012 370 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 PTPROQ16827 1216 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 DCAF4L1Q3SXM0 396 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 IQUBQ8NA54 791 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 URGCPQ8TCY9 931 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 DHX58Q96C10 678 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 ZNF558Q96NG5 402 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 GAD1Q99259 594 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 TNMDQ9H2S6 317 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 NRDE2Q9H7Z3 1164 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 ALG13Q9NP73 1137 aaKnown RBP16.67■□□□□ 0.26
ABCF3-208ENST00000471226 KBTBD4Q9NVX7 518 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 MIOSQ9NXC5 875 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 FAM13BQ9NYF5 915 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 PRUNE2Q8WUY3 3088 aa16.67■□□□□ 0.26
ABCF3-208ENST00000471226 FRMD3A2A2Y4 597 aa16.66■□□□□ 0.26
ABCF3-208ENST00000471226 ARL5CA6NH57 179 aa16.66■□□□□ 0.26
ABCF3-208ENST00000471226 ABLIM1O14639 778 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms