RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SFNP31947 248 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 JAK3P52333 1124 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 NTHL1P78549 312 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 HTR4Q13639 388 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 NECTIN1Q15223 517 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 XKR3Q5GH77 459 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 TSSK4Q6SA08 328 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 PARM1Q6UWI2 310 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 ZNF410Q86VK4 478 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 MAML2Q8IZL2 1156 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-204ENST00000470191 TMEM175Q9BSA9 504 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 TRAIPQ9BWF2 469 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 ZMYND12Q9H0C1 365 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 NT5C3AQ9H0P0 336 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 MINDY3Q9H8M7 445 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 DPP7Q9UHL4 492 aa10.23□□□□□ -0.77
CCDC171-204ENST00000470191 MTF2Q9Y483 593 aaPredicted RBP10.23□□□□□ -0.77
CCDC171-204ENST00000470191 TGM5O43548 720 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 SEC24BO95487 1268 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 ITGA4P13612 1032 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 CPA1P15085 419 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 FSHRP23945 695 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 MLH1P40692 756 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 SCNN1GP51170 649 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 ATXN1P54253 815 aaKnown RBP10.22□□□□□ -0.77
CCDC171-204ENST00000470191 NPEPPSP55786 919 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 FGD1P98174 961 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 CDC42EP1Q00587 391 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 UBXN11Q5T124 520 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 KIAA0319Q5VV43 1072 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 GRASPQ7Z6J2 395 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-204ENST00000470191 MRPL10Q7Z7H8 261 aaKnown RBP10.22□□□□□ -0.77
CCDC171-204ENST00000470191 TEX2Q8IWB9 1127 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 CCDC12Q8WUD4 166 aaPredicted RBP10.22□□□□□ -0.77
CCDC171-204ENST00000470191 ATRIPQ8WXE1 791 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 RSPH1Q8WYR4 309 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 SLC5A5Q92911 643 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 FGF14Q92915 247 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 NXPE3Q969Y0 559 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 TMEM143Q96AN5 459 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 SHDQ96IW2 340 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 CPB2Q96IY4 423 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 CEP89Q96ST8 783 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 GAD1Q99259 594 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 KXD1Q9BQD3 176 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 ESYT1Q9BSJ8 1104 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 NIFKQ9BYG3 293 aaKnown RBP10.22□□□□□ -0.77
CCDC171-204ENST00000470191 BCO2Q9BYV7 579 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 IFT122Q9HBG6 1241 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 AGPAT5Q9NUQ2 364 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 MIOSQ9NXC5 875 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.22□□□□□ -0.77
CCDC171-204ENST00000470191 KANSL3Q9P2N6 904 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 STK39Q9UEW8 545 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 CDV3Q9UKY7 258 aaKnown RBP10.22□□□□□ -0.77
CCDC171-204ENST00000470191 POLIQ9UNA4 740 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 SSX2IPQ9Y2D8 614 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 HES2Q9Y543 173 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 COL4A3BPQ9Y5P4 624 aa10.22□□□□□ -0.77
CCDC171-204ENST00000470191 DNAH14Q0VDD8 3507 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 IGKV6-21A0A0C4DH24 114 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 KANSL1LA0AUZ9 987 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 ESYT2A0FGR8 921 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 ARL5CA6NH57 179 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 FAM170BA6NMN3 283 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 ANHXE9PGG2 379 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 EDIL3O43854 480 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 MAFO75444 373 aaPredicted RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 STBD1O95210 358 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 GNA11P29992 359 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 CIITAP33076 1130 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 VASPP50552 380 aaPredicted RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 STARD6P59095 220 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 EXOSC10Q01780 885 aaKnown RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 AKAP17AQ02040 695 aaKnown RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 LPAL2Q16609 132 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 ADCK5Q3MIX3 580 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 PRSS55Q6UWB4 352 aaPredicted RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 CYP26C1Q6V0L0 522 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 COLGALT2Q8IYK4 626 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 SMG8Q8ND04 991 aaKnown RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 PRPF31Q8WWY3 499 aaKnown RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 CHAMP1Q96JM3 812 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 ZFP42Q96MM3 310 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 RIT2Q99578 217 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 EIF2AQ9BY44 585 aaKnown RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 PRKD2Q9BZL6 878 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 RXFP1Q9HBX9 757 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 SLC2A4RGQ9NR83 387 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 VPS54Q9P1Q0 977 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 CACNG4Q9UBN1 327 aa10.21□□□□□ -0.77
CCDC171-204ENST00000470191 SMG5Q9UPR3 1016 aaKnown RBP10.21□□□□□ -0.77
CCDC171-204ENST00000470191 CNTNAP2Q9UHC6 1331 aa10.21□□□□□ -0.78
CCDC171-204ENST00000470191 KMT2BQ9UMN6 2715 aaPredicted RBP10.21□□□□□ -0.78
CCDC171-204ENST00000470191 RALGAPA1Q6GYQ0 2036 aa10.21□□□□□ -0.78
CCDC171-204ENST00000470191 CCL16O15467 120 aa10.2□□□□□ -0.78
CCDC171-204ENST00000470191 PSMD10O75832 226 aa10.2□□□□□ -0.78
CCDC171-204ENST00000470191 ERLIN2O94905 339 aa10.2□□□□□ -0.78
CCDC171-204ENST00000470191 TDP2O95551 362 aa10.2□□□□□ -0.78
CCDC171-204ENST00000470191 NCLP19338 710 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms