RNA–Protein interactions for RNA: ENST00000469739.6

TOP3A-203, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 3,196 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-203ENST00000469739 SEMA4DQ92854 862 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ACCSQ96QU6 501 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 PPP1R16BQ96T49 567 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 FAM107BQ9H098 131 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
TOP3A-203ENST00000469739 WDR64B1ANS9 1081 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 SLC16A3O15427 465 aaKnown RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 RGS20O76081 388 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 FTLP02792 175 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 MXI1P50539 228 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 ZNF131P52739 623 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 RPUSD2Q8IZ73 545 aaKnown RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 TAS1R2Q8TE23 839 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 SLC16A10Q8TF71 515 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 LPAR1Q92633 364 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 ARL8AQ96BM9 186 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 ZBED3Q96IU2 234 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 ZBTB45Q96K62 511 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 A1CFQ9NQ94 594 aaKnown RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 ODF2LQ9ULJ1 636 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 ADGRA3Q8IWK6 1321 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 DDNO94850 711 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 FGGP02679 453 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 JAM2P57087 298 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 PSMC5P62195 406 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 SP2Q02086 613 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 SNRNP35Q16560 246 aaKnown RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 FKBP1CQ5VVH2 108 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 SPOPLQ6IQ16 392 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 B3GNT9Q6UX72 402 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 CEP120Q8N960 986 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 UHMK1Q8TAS1 419 aaKnown RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 CASKIN2Q8WXE0 1202 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 TATDN2Q93075 761 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 RUFY1Q96T51 708 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 STK33Q9BYT3 514 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 GPR88Q9GZN0 384 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 TMEM117Q9H0C3 514 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 COG5Q9UP83 839 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 NOC2LQ9Y3T9 749 aaKnown RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 AGPSO00116 658 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 FERP16591 822 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 DMP1Q13316 513 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 RPAINQ86UA6 219 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 EGFL6Q8IUX8 553 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 MSL3Q8N5Y2 521 aaKnown RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 FAM71BQ8TC56 605 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 KAT2BQ92831 832 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 RPGRIP1Q96KN7 1286 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 INPP4AQ96PE3 977 aaPredicted RBP10.18□□□□□ -0.78
TOP3A-203ENST00000469739 PCDHGC5Q9Y5F6 944 aa10.18□□□□□ -0.78
TOP3A-203ENST00000469739 LRRIQ4A6NIV6 560 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 HNRNPH1P31943 449 aaKnown RBP10.17□□□□□ -0.78
TOP3A-203ENST00000469739 GJC1P36383 396 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 HIRAP54198 1017 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TTLL12Q14166 644 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TREML2Q5T2D2 321 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 MAATS1Q7Z4T9 603 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 NCAPG2Q86XI2 1143 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 SCYL3Q8IZE3 742 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 MMGT1Q8N4V1 131 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 GLG1Q92896 1179 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TRIM51Q9BSJ1 452 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 VPS33BQ9H267 617 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TBC1D22BQ9NU19 505 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 SYNPO2Q9UMS6 1093 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 PCDHA10Q9Y5I2 948 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 CCDC189A1A4V9 331 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TTI1O43156 1089 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 MMEP08473 750 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 LIG3P49916 1009 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 C1orf220Q5T0J3 134 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 GADL1Q6ZQY3 521 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TRIM50Q86XT4 487 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 PASD1Q8IV76 773 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TMEM130Q8N3G9 435 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 USP38Q8NB14 1042 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 KRT35Q92764 455 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 DMAC2Q9NW81 257 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 SEL1LQ9UBV2 794 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 ZNF214Q9UL59 606 aaPredicted RBP10.17□□□□□ -0.78
TOP3A-203ENST00000469739 TBX20Q9UMR3 447 aa10.17□□□□□ -0.78
TOP3A-203ENST00000469739 ADM5C9JUS6 153 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 SART1O43290 800 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 DAPK3O43293 454 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 PGK2P07205 417 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 TNNI1P19237 187 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 RFX1P22670 979 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 SMTNP53814 917 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 OSTNP61366 133 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 PRKCEQ02156 737 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 BIRC3Q13489 604 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 ZBTB41Q5SVQ8 909 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 VSIG10LQ86VR7 867 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 MTMR14Q8NCE2 650 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 PPP1R13LQ8WUF5 828 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 SPOCK2Q92563 424 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 PCDHB18PQ96TA0 734 aa10.16□□□□□ -0.78
TOP3A-203ENST00000469739 MOV10L1Q9BXT6 1211 aaKnown RBP10.16□□□□□ -0.78
TOP3A-203ENST00000469739 ACBD3Q9H3P7 528 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms