RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 LINC01553A4QN01 128 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 MYMKA6NI61 221 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 TBKBP1A7MCY6 615 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 C5orf67F2Z3F1 127 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 K7ENM7 598 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 INPPL1O15357 1258 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 SLC16A4O15374 487 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 TOM1L1O75674 476 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 ITGA4P13612 1032 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 PFKFB1P16118 471 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 LAG3P18627 525 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 PPM1AP35813 382 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 PBX2P40425 430 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 TAP1Q03518 808 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 RAD51AP2Q09MP3 1159 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 ATF7IP2Q5U623 682 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 FAM117BQ6P1L5 589 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 HAUS6Q7Z4H7 955 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 URGCPQ8TCY9 931 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 P2RX5Q93086 422 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 CCDC47Q96A33 483 aaKnown RBP9.4□□□□□ -0.9
SSBP1-208ENST00000469123 DNAJC19Q96DA6 116 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 GAS2L1Q99501 681 aaPredicted RBP9.4□□□□□ -0.9
SSBP1-208ENST00000469123 C11orf84Q9BUA3 381 aaPredicted RBP9.4□□□□□ -0.9
SSBP1-208ENST00000469123 GTPBP4Q9BZE4 634 aaKnown RBP9.4□□□□□ -0.9
SSBP1-208ENST00000469123 TRIM9Q9C026 710 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 ZHX3Q9H4I2 956 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 RSAD1Q9HA92 442 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 RTN4Q9NQC3 1192 aaKnown RBP9.4□□□□□ -0.9
SSBP1-208ENST00000469123 LMCD1Q9NZU5 365 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 HOOK1Q9UJC3 728 aaKnown RBP9.4□□□□□ -0.9
SSBP1-208ENST00000469123 PCDHB13Q9Y5F0 798 aa9.4□□□□□ -0.9
SSBP1-208ENST00000469123 UBE4BO95155 1302 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 PIGRP01833 764 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 MCF2P10911 925 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 IDEP14735 1019 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 ATF7P17544 494 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-208ENST00000469123 ASIC1P78348 528 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 GTF2BQ00403 316 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 POU5F1Q01860 360 aaKnown RBP9.39□□□□□ -0.91
SSBP1-208ENST00000469123 HERC4Q5GLZ8 1057 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-208ENST00000469123 NOMO2Q5JPE7 1267 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 UBXN11Q5T124 520 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 SLFN12LQ6IEE8 588 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 MPZL3Q6UWV2 235 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 UNC13DQ70J99 1090 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 DYMQ7RTS9 669 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 ZNF720Q7Z2F6 126 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 FSIP1Q8NA03 581 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 TMEM87AQ8NBN3 555 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 LRRC15Q8TF66 581 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 CPB2Q96IY4 423 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 ACO2Q99798 780 aaKnown RBP9.39□□□□□ -0.91
SSBP1-208ENST00000469123 KIFC3Q9BVG8 833 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 PANK2Q9BZ23 570 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 LMAN2LQ9H0V9 348 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 PDZD7Q9H5P4 517 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 TMEM206Q9H813 350 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 MRPL44Q9H9J2 332 aaKnown RBP9.39□□□□□ -0.91
SSBP1-208ENST00000469123 TOPORSQ9NS56 1045 aaPredicted RBP9.39□□□□□ -0.91
SSBP1-208ENST00000469123 PANK4Q9NVE7 773 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 MTMR10Q9NXD2 777 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 TBX20Q9UMR3 447 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 IPPQ9Y573 584 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 PCDHB12Q9Y5F1 795 aa9.39□□□□□ -0.91
SSBP1-208ENST00000469123 TDRD15B5MCY1 1934 aaKnown RBP9.39□□□□□ -0.91
SSBP1-208ENST00000469123 NPHP3-ACAD11A0A0J9YXS1 232 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 A0A1B0GVL5 298 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 SFI1A8K8P3 1242 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 HNRNPDLO14979 420 aaKnown RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 KIAA0391O15091 583 aaKnown RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 EIF3DO15371 548 aaKnown RBP eCLIP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 B4GALT5O43286 388 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 ACTN4O43707 911 aaKnown RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 GTPBP6O43824 516 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 NPTXRO95502 500 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 FGFR1P11362 822 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 MYOGP15173 224 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 LIG1P18858 919 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 POU3F3P20264 500 aaPredicted RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 PROZP22891 400 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 BMPR1AP36894 532 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 LIG4P49917 911 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 YARSP54577 528 aaKnown RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 SNRPFP62306 86 aaKnown RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 UBE3AQ05086 875 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 FAM160A1Q05DH4 1040 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 MCL1Q07820 350 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 COASYQ13057 564 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 PSMD2Q13200 908 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 BMS1Q14692 1282 aaKnown RBP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 NOLC1Q14978 699 aaKnown RBP eCLIP9.38□□□□□ -0.91
SSBP1-208ENST00000469123 POSTNQ15063 836 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 PTPROQ16827 1216 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 ZNF568Q3ZCX4 644 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 CLEC17AQ6ZS10 378 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 SFR1Q86XK3 245 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 MAP4K3Q8IVH8 894 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 TMEM192Q8IY95 271 aa9.38□□□□□ -0.91
SSBP1-208ENST00000469123 ELOA2Q8IYF1 753 aaPredicted RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms