RNA–Protein interactions for RNA: ENST00000468792.1

COL6A3-208, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 329 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-208ENST00000468792 PCYT2Q99447 389 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 TLR10Q9BXR5 811 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 PARD6BQ9BYG5 372 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 TMEM117Q9H0C3 514 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 IKZF4Q9H2S9 585 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 ANKZF1Q9H8Y5 726 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 ARFGAP3Q9NP61 516 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.26□□□□□ -1.09
COL6A3-208ENST00000468792 SEPT9Q9UHD8 586 aaPredicted RBP8.26□□□□□ -1.09
COL6A3-208ENST00000468792 SALL4Q9UJQ4 1053 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 CAPN6Q9Y6Q1 641 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 V9GYY5 206 aaPredicted RBP8.26□□□□□ -1.09
COL6A3-208ENST00000468792 EMSYQ7Z589 1322 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 LRRC37A2A6NM11 1700 aa8.26□□□□□ -1.09
COL6A3-208ENST00000468792 RBM47A0AV96 593 aaKnown RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TMEM150BA6NC51 233 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 ZNF233A6NK53 670 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 ANKRD63C9JTQ0 380 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 DDX3XO00571 662 aaKnown RBP eCLIP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 ENC1O14682 589 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 STRNO43815 780 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 CLSTN1O94985 981 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 MOCS3O95396 460 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TMEM253P0C7T8 217 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TRIM49P0CI25 452 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TRIM49CP0CI26 452 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 KLRC1P26715 233 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 GCLCP48506 637 aaPredicted RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 AP3M2P53677 418 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 ERVK-9P63128 1117 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 FAM193AP78312 1265 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 POU5F1Q01860 360 aaKnown RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 APBA1Q02410 837 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 GCNT1Q02742 428 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 POU5F1BQ06416 359 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 STRN3Q13033 797 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 MXD4Q14582 209 aaPredicted RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 PSMD6Q15008 389 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TEX35Q5T0J7 233 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 CC2D1AQ6P1N0 951 aaPredicted RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 SLC39A4Q6P5W5 647 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 SEPT14Q6ZU15 432 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 MAEAQ7L5Y9 396 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TAS1R3Q7RTX0 852 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 FAM71AQ8IYT1 594 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 LRRC57Q8N9N7 239 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 PLEKHO2Q8TD55 490 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TCP11Q8WWU5 503 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 PSPC1Q8WXF1 523 aaKnown RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 SHC3Q92529 594 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 PBKQ96KB5 322 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 OSBPL9Q96SU4 736 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 MMP19Q99542 508 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 POLR3FQ9H1D9 316 aaPredicted RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 MLXIPQ9HAP2 919 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 ZNF446Q9NWS9 450 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 MORF4L1Q9UBU8 362 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 AJAP1Q9UKB5 411 aaPredicted RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 TFR2Q9UP52 801 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 DIS3Q9Y2L1 958 aaKnown RBP8.25□□□□□ -1.09
COL6A3-208ENST00000468792 NCANO14594 1321 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 ADGRA3Q8IWK6 1321 aa8.25□□□□□ -1.09
COL6A3-208ENST00000468792 MYH10P35580 1976 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 SIP14410 1827 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 A0A0B4J269 797 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 A0A0U1RQG5 324 aaPredicted RBP8.24□□□□□ -1.09
COL6A3-208ENST00000468792 ANKRD62A6NC57 917 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 LRRIQ3A6PVS8 624 aaPredicted RBP8.24□□□□□ -1.09
COL6A3-208ENST00000468792 TULP1O00294 542 aaPredicted RBP8.24□□□□□ -1.09
COL6A3-208ENST00000468792 FOXN3O00409 490 aaPredicted RBP8.24□□□□□ -1.09
COL6A3-208ENST00000468792 HNRNPDLO14979 420 aaKnown RBP8.24□□□□□ -1.09
COL6A3-208ENST00000468792 ASAP2O43150 1006 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 ADCY3O60266 1144 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 MTA2O94776 668 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 GGPS1O95749 300 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 ADRB2P07550 413 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 CETPP11597 493 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 GLRA2P23416 452 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 PAFAH1B1P43034 410 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 GTF2A2P52657 109 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 MFAP3P55082 362 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 DLG4P78352 724 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 ARID5AQ03989 594 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 FSTL1Q12841 308 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 CLUL1Q15846 466 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 Q3C1V9 767 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 MTERF2Q49AM1 385 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 CFAP221Q4G0U5 840 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 CDCA2Q69YH5 1023 aaPredicted RBP8.24□□□□□ -1.09
COL6A3-208ENST00000468792 CCDC70Q6NSX1 233 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 ANKRD23Q86SG2 305 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 CBWD2Q8IUF1 395 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 FBXL13Q8NEE6 735 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 GPRC5AQ8NFJ5 357 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 ATP8B4Q8TF62 1192 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 SCFD2Q8WU76 684 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 POMGNT1Q8WZA1 660 aa8.24□□□□□ -1.09
COL6A3-208ENST00000468792 SLC10A4Q96EP9 437 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms