RNA–Protein interactions for RNA: ENST00000467985.1

COL7A1-207, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 709 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-207ENST00000467985 CXCL14O95715 111 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 ALDH2P05091 517 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 HOXB8P17481 243 aaPredicted RBP21.12■□□□□ 0.97
COL7A1-207ENST00000467985 GJB2P29033 226 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 SLC11A1P49279 550 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 PPP2R5AQ15172 486 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 DTHD1Q6ZMT9 781 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 ZNF280BQ86YH2 543 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 TMEM87AQ8NBN3 555 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 VN1R2Q8NFZ6 395 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 KHSRPQ92945 711 aaKnown RBP eCLIP21.12■□□□□ 0.97
COL7A1-207ENST00000467985 ZBP1Q9H171 429 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.12■□□□□ 0.97
COL7A1-207ENST00000467985 KIAA1024Q9UPX6 916 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.12■□□□□ 0.97
COL7A1-207ENST00000467985 IRAK3Q9Y616 596 aa21.12■□□□□ 0.97
COL7A1-207ENST00000467985 ZMYM2Q9UBW7 1377 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 ARL5CA6NH57 179 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 CD2BP2O95400 341 aaKnown RBP21.11■□□□□ 0.97
COL7A1-207ENST00000467985 NAMPTP43490 491 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 FAM187BQ17R55 369 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 KRT79Q5XKE5 535 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 TMEM173Q86WV6 379 aaPredicted RBP21.11■□□□□ 0.97
COL7A1-207ENST00000467985 SNX29Q8TEQ0 813 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 KIFAP3Q92845 792 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 CASP10Q92851 521 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 BHMT2Q9H2M3 363 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 FZD8Q9H461 694 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 SMC3Q9UQE7 1217 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 FAN1Q9Y2M0 1017 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 GIT1Q9Y2X7 761 aa21.11■□□□□ 0.97
COL7A1-207ENST00000467985 USP15Q9Y4E8 981 aaPredicted RBP21.11■□□□□ 0.97
COL7A1-207ENST00000467985 B4GALT5O43286 388 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 GPR37L1O60883 481 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 DDHD2O94830 711 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 POMCP01189 267 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 CTSAP10619 480 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 CA8P35219 290 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 RBM10P98175 930 aaKnown RBP21.1■□□□□ 0.97
COL7A1-207ENST00000467985 TMEM31Q5JXX7 168 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 ANKRD54Q6NXT1 300 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 DEPTORQ8TB45 409 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 IFT74Q96LB3 600 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 DDX19AQ9NUU7 478 aaKnown RBP21.1■□□□□ 0.97
COL7A1-207ENST00000467985 DNM3Q9UQ16 869 aa21.1■□□□□ 0.97
COL7A1-207ENST00000467985 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.09■□□□□ 0.97
COL7A1-207ENST00000467985 DCXO43602 365 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 NR1I2O75469 434 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 COL9A1P20849 921 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 MLH1P40692 756 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 AFF1P51825 1210 aaKnown RBP21.09■□□□□ 0.97
COL7A1-207ENST00000467985 EFNA5P52803 228 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 ECM1Q16610 540 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 MAPK6Q16659 721 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 TPRNQ4KMQ1 711 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 LLGL2Q6P1M3 1020 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 GAD1Q99259 594 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 RNF39Q9H2S5 420 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 NXF3Q9H4D5 531 aaKnown RBP21.09■□□□□ 0.97
COL7A1-207ENST00000467985 HES2Q9Y543 173 aa21.09■□□□□ 0.97
COL7A1-207ENST00000467985 N4BP3O15049 544 aa21.08■□□□□ 0.97
COL7A1-207ENST00000467985 B4GALT3O60512 393 aa21.08■□□□□ 0.97
COL7A1-207ENST00000467985 CLASP2O75122 1294 aaKnown RBP21.08■□□□□ 0.97
COL7A1-207ENST00000467985 NPTXRO95502 500 aa21.08■□□□□ 0.97
COL7A1-207ENST00000467985 ATP2C1P98194 919 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-207ENST00000467985 PRPF4BQ13523 1007 aaKnown RBP21.08■□□□□ 0.97
COL7A1-207ENST00000467985 KCTD17Q8N5Z5 321 aa21.08■□□□□ 0.97
COL7A1-207ENST00000467985 BCL7CQ8WUZ0 217 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-207ENST00000467985 SUSD6Q92537 303 aa21.08■□□□□ 0.97
COL7A1-207ENST00000467985 APOL6Q9BWW8 343 aa21.08■□□□□ 0.97
COL7A1-207ENST00000467985 PHF7Q9BWX1 381 aaPredicted RBP21.08■□□□□ 0.97
COL7A1-207ENST00000467985 HCFC2Q9Y5Z7 792 aa21.08■□□□□ 0.97
COL7A1-207ENST00000467985 ACKR2O00590 384 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 NRP1O14786 923 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 DSC1Q08554 894 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 TMEM132AQ24JP5 1023 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 PPFIBP1Q86W92 1011 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 COLGALT2Q8IYK4 626 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 BSNDQ8WZ55 320 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 S1PR5Q9H228 398 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 DZANK1Q9NVP4 752 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 SSX2IPQ9Y2D8 614 aa21.07■□□□□ 0.96
COL7A1-207ENST00000467985 PRKCBP05771 671 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 OR1G1P47890 313 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 SCNN1GP51170 649 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 ITIH3Q06033 890 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 CBX2Q14781 532 aaPredicted RBP21.06■□□□□ 0.96
COL7A1-207ENST00000467985 IL17AQ16552 155 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 LARP1BQ659C4 914 aaKnown RBP21.06■□□□□ 0.96
COL7A1-207ENST00000467985 ARL6IP4Q66PJ3 421 aaKnown RBP21.06■□□□□ 0.96
COL7A1-207ENST00000467985 SYCE2Q6PIF2 218 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 AUTS2Q8WXX7 1259 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 ZFP42Q96MM3 310 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 ADPGKQ9BRR6 497 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 LRFN3Q9BTN0 628 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 VN1R3Q9BXE9 311 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 EMILIN2Q9BXX0 1053 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 CCDC113Q9H0I3 377 aa21.06■□□□□ 0.96
COL7A1-207ENST00000467985 TDRD15B5MCY1 1934 aaKnown RBP21.06■□□□□ 0.96
COL7A1-207ENST00000467985 LOC730098B7Z3J9 87 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms