RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 CLCN4P51793 760 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 MXD4Q14582 209 aaPredicted RBP19.23■□□□□ 0.67
TRIM56-203ENST00000467847 PCBP1Q15365 356 aaKnown RBP eCLIP19.23■□□□□ 0.67
TRIM56-203ENST00000467847 PLCD3Q8N3E9 789 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 SMG8Q8ND04 991 aaKnown RBP19.23■□□□□ 0.67
TRIM56-203ENST00000467847 SMOC2Q9H3U7 446 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 USTQ9Y2C2 406 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 IPPQ9Y573 584 aa19.23■□□□□ 0.67
TRIM56-203ENST00000467847 INO80B-WBP1J3KQ70 363 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 C2CD2LO14523 706 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 AXLP30530 894 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 AK2P54819 239 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 PTENP60484 403 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 NCBP1Q09161 790 aaKnown RBP19.22■□□□□ 0.67
TRIM56-203ENST00000467847 TFDP1Q14186 410 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 NOTUMQ6P988 496 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 GPR149Q86SP6 731 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 FEZF2Q8TBJ5 459 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 CCDC51Q96ER9 411 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 CPB2Q96IY4 423 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 EIF2AK1Q9BQI3 630 aaKnown RBP19.22■□□□□ 0.67
TRIM56-203ENST00000467847 EIF2AQ9BY44 585 aaKnown RBP19.22■□□□□ 0.67
TRIM56-203ENST00000467847 XPNPEP1Q9NQW7 623 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 PCDHA12Q9UN75 941 aa19.22■□□□□ 0.67
TRIM56-203ENST00000467847 PRG3Q9Y2Y8 225 aaPredicted RBP19.22■□□□□ 0.67
TRIM56-203ENST00000467847 ARL5CA6NH57 179 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 LILRB3O75022 631 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 URODP06132 367 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 MLH1P40692 756 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 OR1G1P47890 313 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 ANAPC15P60006 121 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 CALCRLQ16602 461 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 CCDC149Q6ZUS6 474 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 NECAB1Q8N987 351 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 TNFRSF25Q93038 417 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 ACSF2Q96CM8 615 aaPredicted RBP19.21■□□□□ 0.67
TRIM56-203ENST00000467847 CCDC43Q96MW1 224 aaKnown RBP19.21■□□□□ 0.67
TRIM56-203ENST00000467847 GAD1Q99259 594 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 RNF39Q9H2S5 420 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 HES2Q9Y543 173 aa19.21■□□□□ 0.67
TRIM56-203ENST00000467847 PLXNA3P51805 1871 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 SOD2P04179 222 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 FDPSP14324 419 aaKnown RBP19.2■□□□□ 0.66
TRIM56-203ENST00000467847 NUBP1P53384 320 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 OTOP3Q7RTS5 596 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 COLGALT2Q8IYK4 626 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 ASAP3Q8TDY4 903 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 HSD17B14Q9BPX1 270 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 HERC2P3Q9BVR0 1158 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 TRIM6Q9C030 488 aaPredicted RBP19.2■□□□□ 0.66
TRIM56-203ENST00000467847 CSRNP2Q9H175 543 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 ANKEF1Q9NU02 776 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 MARCH5Q9NX47 278 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 SSX2IPQ9Y2D8 614 aa19.2■□□□□ 0.66
TRIM56-203ENST00000467847 INPPL1O15357 1258 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 DGAT1O75907 488 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 LYPLA2O95372 231 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 MBTD1Q05BQ5 628 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 POU5F1BQ06416 359 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 CAPSQ13938 189 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 TAS1R1Q7RTX1 841 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 IFNLR1Q8IU57 520 aaPredicted RBP19.19■□□□□ 0.66
TRIM56-203ENST00000467847 GTF3C6Q969F1 213 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 ZFP42Q96MM3 310 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 RPS6KC1Q96S38 1066 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 APOL6Q9BWW8 343 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 TTC12Q9H892 705 aaPredicted RBP19.19■□□□□ 0.66
TRIM56-203ENST00000467847 MAN1C1Q9NR34 630 aa19.19■□□□□ 0.66
TRIM56-203ENST00000467847 GALR2O43603 387 aaPredicted RBP19.18■□□□□ 0.66
TRIM56-203ENST00000467847 NEMFO60524 1076 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 NR1I2O75469 434 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 ADH1AP07327 375 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 TXKP42681 527 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 GLUD2P49448 558 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 SCNN1GP51170 649 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 DSC1Q08554 894 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 ME3Q16798 604 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 C15orf39Q6ZRI6 1047 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 HACE1Q8IYU2 909 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 MFSD1Q9H3U5 465 aa19.18■□□□□ 0.66
TRIM56-203ENST00000467847 NXF3Q9H4D5 531 aaKnown RBP19.18■□□□□ 0.66
TRIM56-203ENST00000467847 BTBD18B2RXH4 712 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 TEX28O15482 410 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 LARGE1O95461 756 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 ARF4P18085 180 aaPredicted RBP19.17■□□□□ 0.66
TRIM56-203ENST00000467847 GLRA2P23416 452 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 ARL2P36404 184 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 RARRES1P49788 294 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 FOSBP53539 338 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 TRIM29Q14134 588 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 AMHR2Q16671 573 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 ELMSAN1Q6PJG2 1045 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 ASCL5Q7RTU5 278 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 DIS3L2Q8IYB7 885 aaKnown RBP19.17■□□□□ 0.66
TRIM56-203ENST00000467847 TMEM105Q8N8V8 129 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 PIGOQ8TEQ8 1089 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 NFKBIZQ9BYH8 718 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 POLR3FQ9H1D9 316 aaPredicted RBP19.17■□□□□ 0.66
TRIM56-203ENST00000467847 MIOSQ9NXC5 875 aa19.17■□□□□ 0.66
TRIM56-203ENST00000467847 GIT1Q9Y2X7 761 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms