RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 TMEM117Q9H0C3 514 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 NXF3Q9H4D5 531 aaKnown RBP12.16□□□□□ -0.46
MSH5-212ENST00000467319 ZNF576Q9H609 170 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 SLC28A3Q9HAS3 691 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 PTPRHQ9HD43 1115 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 USP25Q9UHP3 1055 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 LRFN2Q9ULH4 789 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 USP20Q9Y2K6 914 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 IPPQ9Y573 584 aa12.16□□□□□ -0.46
MSH5-212ENST00000467319 K7ENM7 598 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 K7ERI5 159 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 N4BP3O15049 544 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 SYKP43405 635 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 ERVK-21P61565 698 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 GTF2BQ00403 316 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 NCBP1Q09161 790 aaKnown RBP12.15□□□□□ -0.46
MSH5-212ENST00000467319 DCAF4L1Q3SXM0 396 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 ATF7IP2Q5U623 682 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 ZPBP2Q6X784 338 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 AGMOQ6ZNB7 445 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 CLEC17AQ6ZS10 378 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 CDR2LQ86X02 465 aaPredicted RBP12.15□□□□□ -0.46
MSH5-212ENST00000467319 FAM178BQ8IXR5 827 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 DEFB123Q8N688 67 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 MYCT1Q8N699 235 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 SLC17A8Q8NDX2 589 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 CNNM3Q8NE01 707 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 STAMQ92783 540 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 HVCN1Q96D96 273 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 GUCD1Q96NT3 240 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 CASD1Q96PB1 797 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 ACO2Q99798 780 aaKnown RBP12.15□□□□□ -0.46
MSH5-212ENST00000467319 MRPL4Q9BYD3 311 aaKnown RBP12.15□□□□□ -0.46
MSH5-212ENST00000467319 FGFBP2Q9BYJ0 223 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 LRRC27Q9C0I9 530 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 SEMA6BQ9H3T3 888 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 SERTAD1Q9UHV2 236 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 TNFSF13BQ9Y275 285 aa12.15□□□□□ -0.46
MSH5-212ENST00000467319 MRPL42Q9Y6G3 142 aaKnown RBP12.15□□□□□ -0.46
MSH5-212ENST00000467319 REV3LO60673 3130 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 EPOPA6NHQ4 379 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 NPTXRO95502 500 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 ABCD1P33897 745 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 AMPD3Q01432 767 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 COASYQ13057 564 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 BTG3Q14201 252 aaPredicted RBP12.14□□□□□ -0.47
MSH5-212ENST00000467319 GRIN2CQ14957 1233 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 LONRF3Q496Y0 759 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 GRAMD1CQ8IYS0 662 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 CEP57L1Q8IYX8 460 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 FMR1NBQ8N0W7 255 aaPredicted RBP12.14□□□□□ -0.47
MSH5-212ENST00000467319 LRRC43Q8N309 656 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 RNF169Q8NCN4 708 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 ENGASEQ8NFI3 743 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 LPPQ93052 612 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 PAGE5Q96GU1 130 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 SAMD11Q96NU1 681 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 TGS1Q96RS0 853 aaKnown RBP12.14□□□□□ -0.47
MSH5-212ENST00000467319 TARS2Q9BW92 718 aaKnown RBP12.14□□□□□ -0.47
MSH5-212ENST00000467319 CDT1Q9H211 546 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 MTMR10Q9NXD2 777 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 HCSTQ9UBK5 93 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 TBX20Q9UMR3 447 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 HES2Q9Y543 173 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 COL6A3P12111 3177 aa12.14□□□□□ -0.47
MSH5-212ENST00000467319 ATG2AQ2TAZ0 1938 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 TBKBP1A7MCY6 615 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 C5orf67F2Z3F1 127 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 TOM1L1O75674 476 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 MYL1P05976 194 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 LIG1P18858 919 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 IBSPP21815 317 aaPredicted RBP12.13□□□□□ -0.47
MSH5-212ENST00000467319 CASP1P29466 404 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 NMT1P30419 496 aaKnown RBP12.13□□□□□ -0.47
MSH5-212ENST00000467319 CASP5P51878 434 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 ASIC1P78348 528 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 FAM160A1Q05DH4 1040 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 STRN3Q13033 797 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 SNW1Q13573 536 aaKnown RBP12.13□□□□□ -0.47
MSH5-212ENST00000467319 CUL4BQ13620 913 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 ALCAMQ13740 583 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 CSPP1Q1MSJ5 1256 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 ZNF568Q3ZCX4 644 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 PAN2Q504Q3 1202 aaKnown RBP12.13□□□□□ -0.47
MSH5-212ENST00000467319 SLC39A4Q6P5W5 647 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 GLB1LQ6UWU2 654 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 MPZL3Q6UWV2 235 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 KRBA2Q6ZNG9 492 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 LRRC55Q6ZSA7 311 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 UNC13DQ70J99 1090 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 ZNF720Q7Z2F6 126 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 CCDC65Q8IXS2 484 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 FIBCD1Q8N539 461 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 HELQQ8TDG4 1101 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 PGBD4Q96DM1 585 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 C17orf80Q9BSJ5 609 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 MRPL9Q9BYD2 267 aaKnown RBP12.13□□□□□ -0.47
MSH5-212ENST00000467319 RNF39Q9H2S5 420 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 ZHX3Q9H4I2 956 aa12.13□□□□□ -0.47
MSH5-212ENST00000467319 CWH43Q9H720 699 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms