RNA–Protein interactions for RNA: ENST00000467246.5

HPS1-208, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 1 (best)

Gene HPS1, Length 2,791 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-208ENST00000467246 MYPNQ86TC9 1320 aa12.37□□□□□ -0.43
HPS1-208ENST00000467246 ESYT3A0FGR9 886 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 ADM5C9JUS6 153 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 BUB1BO60566 1050 aaPredicted RBP12.36□□□□□ -0.43
HPS1-208ENST00000467246 DKC1O60832 514 aaKnown RBP eCLIP12.36□□□□□ -0.43
HPS1-208ENST00000467246 STAM2O75886 525 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 TMEM253P0C7T8 217 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 SUPT20HL2P0C7V6 817 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 MIS18BP1Q6P0N0 1132 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 LBX2Q6XYB7 198 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 NT5DC3Q86UY8 548 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 PPM1KQ8N3J5 372 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 LMBR1Q8WVP7 490 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 CTNNBL1Q8WYA6 563 aaPredicted RBP12.36□□□□□ -0.43
HPS1-208ENST00000467246 RFFLQ8WZ73 363 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 KREMEN1Q96MU8 473 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 POLR3FQ9H1D9 316 aaPredicted RBP12.36□□□□□ -0.43
HPS1-208ENST00000467246 C17orf75Q9HAS0 396 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 FAN1Q9Y2M0 1017 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 DAAM1Q9Y4D1 1078 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 WDR81Q562E7 1941 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 TULP2O00295 520 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 HNRNPDLO14979 420 aaKnown RBP12.36□□□□□ -0.43
HPS1-208ENST00000467246 SND1Q7KZF4 910 aaKnown RBP eCLIP12.36□□□□□ -0.43
HPS1-208ENST00000467246 FMNL3Q8IVF7 1028 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 MCPH1Q8NEM0 835 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 HVCN1Q96D96 273 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 R3HDMLQ9H3Y0 253 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 ATP6V0A4Q9HBG4 840 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 ADAM21Q9UKJ8 722 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 COG5Q9UP83 839 aa12.36□□□□□ -0.43
HPS1-208ENST00000467246 SGPL1O95470 568 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 SYF2O95926 243 aaKnown RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 DLATP10515 647 aaKnown RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 MCCD1P59942 119 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 GLE1Q53GS7 698 aaKnown RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 XKR3Q5GH77 459 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 KLHL7Q8IXQ5 586 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 RPUSD2Q8IZ73 545 aaKnown RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 CHST13Q8NET6 341 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 TAS1R2Q8TE23 839 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 RIN2Q8WYP3 895 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 TMEM143Q96AN5 459 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 FBXL18Q96ME1 805 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 TMEM59LQ9UK28 342 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 NCANO14594 1321 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 SYNGAP1Q96PV0 1343 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 CES2O00748 559 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 PMM2O15305 246 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 CYP26A1O43174 497 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 HEXIM1O94992 359 aaKnown RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 PPATQ06203 517 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 TRADDQ15628 312 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 KCTD19Q17RG1 926 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 HSP90B2PQ58FF3 399 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 KRT39Q6A163 491 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 DNERQ8NFT8 737 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 RUBCNQ92622 972 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 BICD1Q96G01 975 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 PBKQ96KB5 322 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 MFSD14AQ96MC6 490 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 FAM213AQ9BRX8 229 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 AP1M1Q9BXS5 423 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 ACBD3Q9H3P7 528 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 EPB41L5Q9HCM4 733 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 SUCLA2Q9P2R7 463 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 CHORDC1Q9UHD1 332 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 RSPH14Q9UHP6 348 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 LCTP09848 1927 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 ANKRD62A6NC57 917 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 FTLP02792 175 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 CARSP49589 748 aaKnown RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 GUCY2DQ02846 1103 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 CYP24A1Q07973 514 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 EMC2Q15006 297 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 SV2AQ7L0J3 742 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 NOP9Q86U38 636 aaKnown RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 FAM71AQ8IYT1 594 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 SYCE1Q8N0S2 351 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 PROCA1Q8NCQ7 364 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 EPS8L1Q8TE68 723 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 HES6Q96HZ4 224 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 IFT74Q96LB3 600 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 PCDHB18PQ96TA0 734 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 TMEM8AQ9HCN3 771 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 ZNF302Q9NR11 478 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 ARHGAP28Q9P2N2 729 aa12.35□□□□□ -0.43
HPS1-208ENST00000467246 MAFBQ9Y5Q3 323 aaPredicted RBP12.35□□□□□ -0.43
HPS1-208ENST00000467246 AGPSO00116 658 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 IRF6O14896 467 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 RAD51CO43502 376 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 CHRNB2P17787 502 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 ICAM3P32942 547 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 GGCXP38435 758 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 AARSP49588 968 aaKnown RBP eCLIP12.34□□□□□ -0.43
HPS1-208ENST00000467246 ALDH5A1P51649 535 aaPredicted RBP12.34□□□□□ -0.43
HPS1-208ENST00000467246 POLGP54098 1239 aaPredicted RBP12.34□□□□□ -0.43
HPS1-208ENST00000467246 RTP1P59025 263 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 FAM193AP78312 1265 aa12.34□□□□□ -0.43
HPS1-208ENST00000467246 PRPF4BQ13523 1007 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms