RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 KCNH6Q9H252 994 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 IFT57Q9NWB7 429 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 PRSS50Q9UI38 385 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 SORCS3Q9UPU3 1222 aa4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 MRPL42Q9Y6G3 142 aaKnown RBP4.42□□□□□ -1.7
GTF3C3-209ENST00000466862 A0A087X0B3 334 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 KDM1AO60341 852 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 NRP2O60462 931 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 DNAJC6O75061 913 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 CDC45O75419 566 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 APOBEC3AP31941 199 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 LSP1P33241 339 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 PPARAQ07869 468 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 MGAT5Q09328 741 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 PITRM1Q5JRX3 1037 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 LAIR1Q6GTX8 287 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 VRK3Q8IV63 474 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 GLB1L3Q8NCI6 653 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 CPT1CQ8TCG5 803 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 PROKR1Q8TCW9 393 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 CPPED1Q9BRF8 314 aaPredicted RBP4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 NDC1Q9BTX1 674 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 SLC46A2Q9BY10 475 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 USP18Q9UMW8 372 aa4.41□□□□□ -1.7
GTF3C3-209ENST00000466862 CENPVL1A0A0U1RR11 272 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 MARCH11A6NNE9 402 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 ENPP3O14638 875 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 FKBP9O95302 570 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 ABHD16AO95870 558 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 LMNAP02545 664 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 LTA4HP09960 611 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 GYPEP15421 78 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 BPIP17213 487 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 FBLP22087 321 aaKnown RBP4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 OCRLQ01968 901 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 MEF2AQ02078 507 aaPredicted RBP4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 DUSP2Q05923 314 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 FKBP9P1Q75LS8 142 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 FAM83AQ86UY5 434 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 PRIMA1Q86XR5 153 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 GLB1L2Q8IW92 636 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 OR2W6PQ8NHA6 318 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 CDY2AQ9Y6F7 541 aa4.4□□□□□ -1.71
GTF3C3-209ENST00000466862 COL4A3Q01955 1670 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 TMEM200CA6NKL6 621 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 LEFTY2O00292 366 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 LPXNO60711 386 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 PPFIA4O75335 1185 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 SCAF4O95104 1147 aaKnown RBP4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 CLEC2LP0C7M8 214 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 ZSCAN20P17040 1043 aaPredicted RBP4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 TYRP1P17643 537 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 NRG3P56975 720 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 FSTL1Q12841 308 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 UBE3CQ15386 1083 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 LY6G5CQ5SRR4 150 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 METRNLQ641Q3 311 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 KCNV1Q6PIU1 500 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 LMBR1LQ6UX01 489 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 Q6YL49 198 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 FRMD7Q6ZUT3 714 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 XYLT1Q86Y38 959 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 DNAJC10Q8IXB1 793 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 AHI1Q8N157 1196 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 SYNE4Q8N205 404 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 BEND2Q8NDZ0 799 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 OR5M3Q8NGP4 307 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 GPR150Q8NGU9 434 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 OR14C36Q8NHC7 312 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 RSAD2Q8WXG1 361 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 SLC5A5Q92911 643 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 MYEOVQ96EZ4 313 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 NEU1Q99519 415 aa4.39□□□□□ -1.71
GTF3C3-209ENST00000466862 GCP02774 474 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 SCNN1BP51168 640 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 IL2P60568 153 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 PDCD1Q15116 288 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 DDB1Q16531 1140 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 BEAN1Q3B7T3 259 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 BROXQ5VW32 411 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 ANKS6Q68DC2 871 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 IQSEC1Q6DN90 963 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 CCDC62Q6P9F0 684 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 DRICH1Q6PGQ1 229 aaPredicted RBP4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 ABHD15Q6UXT9 468 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 GDF7Q7Z4P5 450 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 RNF180Q86T96 592 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 ZG16BQ96DA0 208 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 CEP95Q96GE4 821 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 KCTD10Q9H3F6 313 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 PRDM13Q9H4Q3 707 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 ZMYM3Q14202 1370 aa4.38□□□□□ -1.71
GTF3C3-209ENST00000466862 PDE8AO60658 829 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 ITGA10O75578 1167 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 NCR1O76036 304 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 RECQL4O94761 1208 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 MST1LQ2TV78 715 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 C19orf54Q5BKX5 351 aa4.37□□□□□ -1.71
GTF3C3-209ENST00000466862 HECTD2Q5U5R9 776 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms