RNA–Protein interactions for RNA: ENST00000466579.1

SDCCAG3-208, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 1 (best)

Gene SDCCAG3, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-208ENST00000466579 PTPRHQ9HD43 1115 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 UBN1Q9NPG3 1134 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 KMT5AQ9NQR1 393 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 KBTBD4Q9NVX7 518 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 LARSQ9P2J5 1176 aaKnown RBP10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 IPPQ9Y573 584 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 MTCH2Q9Y6C9 303 aa10.44□□□□□ -0.74
SDCCAG3-208ENST00000466579 PRUNE2Q8WUY3 3088 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 MYMKA6NI61 221 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 CCDC169A6NNP5 214 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 SFI1A8K8P3 1242 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 H0YCG3 227 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 RFXAPO00287 272 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 ABLIM1O14639 778 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 SLC16A4O15374 487 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 PROZP22891 400 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 CMA1P23946 247 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 STAT6P42226 847 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 ME1P48163 572 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 SMTNP53814 917 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 RAD51AP2Q09MP3 1159 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 CSPP1Q1MSJ5 1256 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 PAN2Q504Q3 1202 aaKnown RBP10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 ADALQ6DHV7 355 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 GLB1LQ6UWU2 654 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 LRRC43Q8N309 656 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 IQUBQ8NA54 791 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 HELQQ8TDG4 1101 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 DDX12PQ92771 950 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 LPPQ93052 612 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 CHAMP1Q96JM3 812 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 ACO2Q99798 780 aaKnown RBP10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 C11orf84Q9BUA3 381 aaPredicted RBP10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 STRA6Q9BX79 667 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 LMAN2LQ9H0V9 348 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 TNMDQ9H2S6 317 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 MAGEF1Q9HAY2 307 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 TYW1Q9NV66 732 aaKnown RBP10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 CIZ1Q9ULV3 898 aaPredicted RBP10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 HPSEQ9Y251 543 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 TNFSF13BQ9Y275 285 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 GIT1Q9Y2X7 761 aa10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 PRRC2BQ5JSZ5 2229 aaKnown RBP10.43□□□□□ -0.74
SDCCAG3-208ENST00000466579 PLXNA4Q9HCM2 1894 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 CARNS1A5YM72 827 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 PPP1R37O75864 691 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 PIGRP01833 764 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 LAG3P18627 525 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 ABCD1P33897 745 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 CTNNB1P35222 781 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 GTF2BQ00403 316 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 PLCB3Q01970 1234 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 GPM6BQ13491 265 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 DHX8Q14562 1220 aaKnown RBP10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 DCAF4L1Q3SXM0 396 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 NOMO2Q5JPE7 1267 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 ATF7IP2Q5U623 682 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 EEF1DP3Q658K8 133 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 ZPBP2Q6X784 338 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 ABI1Q8IZP0 508 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 COLGALT1Q8NBJ5 622 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 RNF169Q8NCN4 708 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 SLC17A8Q8NDX2 589 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 GSTCDQ8NEC7 633 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 GDPD5Q8WTR4 605 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 SPATA32Q96LK8 384 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 PYM1Q9BRP8 204 aaKnown RBP10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 MRPL4Q9BYD3 311 aaKnown RBP10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 PANK2Q9BZ23 570 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 NXF3Q9H4D5 531 aaKnown RBP10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 RSAD1Q9HA92 442 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 AAASQ9NRG9 546 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 TBC1D13Q9NVG8 400 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 FAM13BQ9NYF5 915 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 KANSL3Q9P2N6 904 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 HCSTQ9UBK5 93 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 SEL1LQ9UBV2 794 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 MTUS1Q9ULD2 1270 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 PLAGL2Q9UPG8 496 aa10.42□□□□□ -0.74
SDCCAG3-208ENST00000466579 TDRD15B5MCY1 1934 aaKnown RBP10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 A0A1W2PQ27 194 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 A0A1W2PQ64 194 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 A0A1W2PQD8 194 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 TRAK2O60296 914 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 TBCAO75347 108 aaKnown RBP10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 FAM13AO94988 1023 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 NPTXRO95502 500 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 ITGB1P05556 798 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 ITGA4P13612 1032 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 GAP43P17677 238 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 UBE3AQ05086 875 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 CAMK1Q14012 370 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 HAUS6Q7Z4H7 955 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 CDR2LQ86X02 465 aaPredicted RBP10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 HACE1Q8IYU2 909 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 MYCT1Q8N699 235 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 PDILTQ8N807 584 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 KLHL23Q8NBE8 558 aa10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 MAFAQ8NHW3 353 aaPredicted RBP10.41□□□□□ -0.74
SDCCAG3-208ENST00000466579 SPPL3Q8TCT6 385 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms