RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 IFNLR1Q8IU57 520 aaPredicted RBP21.3■■□□□ 1
COL9A3-206ENST00000466532 SUGP1Q8IWZ8 645 aaKnown RBP21.3■■□□□ 1
COL9A3-206ENST00000466532 CCDC51Q96ER9 411 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 RIPOR3Q96MK2 946 aa21.3■■□□□ 1
COL9A3-206ENST00000466532 ATP2B1P20020 1258 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 ARL2P36404 184 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 MBTD1Q05BQ5 628 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 KIAA1841Q6NSI8 718 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 KANK3Q6NY19 840 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 ALYREFQ86V81 257 aaKnown RBP21.29■■□□□ 1
COL9A3-206ENST00000466532 PPFIBP1Q86W92 1011 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 PIGOQ8TEQ8 1089 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 CSRNP2Q9H175 543 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 TMEM60Q9H2L4 133 aa21.29■■□□□ 1
COL9A3-206ENST00000466532 A0A087WWV3 80 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 C2CD4DB7Z1M9 353 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 SEC24BO95487 1268 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 GLRA2P23416 452 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 MCM7P33993 719 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 MLH1P40692 756 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 GUCY1B3Q02153 619 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 SAFBQ15424 915 aaKnown RBP eCLIP21.28■■□□□ 1
COL9A3-206ENST00000466532 AMHR2Q16671 573 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 ATAT1Q5SQI0 421 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 CABP7Q86V35 215 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 FBXL6Q8N531 539 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 KLHL5Q96PQ7 755 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 GAD1Q99259 594 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 APOL6Q9BWW8 343 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 EMILIN2Q9BXX0 1053 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 TRIM6Q9C030 488 aaPredicted RBP21.28■■□□□ 1
COL9A3-206ENST00000466532 POLR3FQ9H1D9 316 aaPredicted RBP21.28■■□□□ 1
COL9A3-206ENST00000466532 RNF39Q9H2S5 420 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 PRG3Q9Y2Y8 225 aaPredicted RBP21.28■■□□□ 1
COL9A3-206ENST00000466532 HES2Q9Y543 173 aa21.28■■□□□ 1
COL9A3-206ENST00000466532 ARL5CA6NH57 179 aa21.27■■□□□ 1
COL9A3-206ENST00000466532 SPDYE4A6NLX3 237 aa21.27■■□□□ 1
COL9A3-206ENST00000466532 USO1O60763 962 aaKnown RBP21.27■■□□□ 1
COL9A3-206ENST00000466532 XRCC6P12956 609 aaKnown RBP eCLIP21.27■■□□□ 1
COL9A3-206ENST00000466532 ARF4P18085 180 aaPredicted RBP21.27■■□□□ 1
COL9A3-206ENST00000466532 KLRC2P26717 231 aa21.27■■□□□ 1
COL9A3-206ENST00000466532 OR1G1P47890 313 aa21.27■■□□□ 1
COL9A3-206ENST00000466532 COLGALT2Q8IYK4 626 aa21.27■■□□□ 1
COL9A3-206ENST00000466532 ASIC4Q96FT7 647 aa21.27■■□□□ 1
COL9A3-206ENST00000466532 NFKBIZQ9BYH8 718 aa21.27■■□□□ 1
COL9A3-206ENST00000466532 MRPL17Q9NRX2 175 aaKnown RBP21.27■■□□□ 1
COL9A3-206ENST00000466532 DBR1Q9UK59 544 aaKnown RBP21.27■■□□□ 1
COL9A3-206ENST00000466532 TRIP11Q15643 1979 aa21.27■□□□□ 0.99
COL9A3-206ENST00000466532 INPPL1O15357 1258 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 SOD2P04179 222 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 CNPP09543 421 aaKnown RBP21.26■□□□□ 0.99
COL9A3-206ENST00000466532 SPATA31C1P0DKV0 1188 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 SCNN1GP51170 649 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 TMC5Q6UXY8 1006 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 MAEAQ7L5Y9 396 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 CCDC83Q8IWF9 413 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 HACE1Q8IYU2 909 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 TDRD5Q8NAT2 981 aaKnown RBP21.26■□□□□ 0.99
COL9A3-206ENST00000466532 KREMEN2Q8NCW0 462 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 SFXN1Q9H9B4 322 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 TUFT1Q9NNX1 390 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 MARCH5Q9NX47 278 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 MIOSQ9NXC5 875 aa21.26■□□□□ 0.99
COL9A3-206ENST00000466532 ZDBF2Q9HCK1 2354 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 C2CD2LO14523 706 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 B4GALT5O43286 388 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 LILRB3O75022 631 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 URODP06132 367 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 CLCN4P51793 760 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 IER5LQ5T953 404 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 CDR2LQ86X02 465 aaPredicted RBP21.25■□□□□ 0.99
COL9A3-206ENST00000466532 CATSPER3Q86XQ3 398 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 PRSS33Q8NF86 280 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 C8orf76Q96K31 380 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 ZFP42Q96MM3 310 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 HERC2P3Q9BVR0 1158 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 NXF3Q9H4D5 531 aaKnown RBP21.25■□□□□ 0.99
COL9A3-206ENST00000466532 GPRC5CQ9NQ84 441 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 LIMCH1Q9UPQ0 1083 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 SORCS3Q9UPU3 1222 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 GIT1Q9Y2X7 761 aa21.25■□□□□ 0.99
COL9A3-206ENST00000466532 LRRIQ4A6NIV6 560 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 MED24O75448 989 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 NPTXRO95502 500 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 DSC1Q08554 894 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 MTMR3Q13615 1198 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 SLC27A1Q6PCB7 646 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 FEZF2Q8TBJ5 459 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 SSX2IPQ9Y2D8 614 aa21.24■□□□□ 0.99
COL9A3-206ENST00000466532 NR1I2O75469 434 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 AKAP5P24588 427 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 MRE11P49959 708 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 TAS1R1Q7RTX1 841 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 GPR149Q86SP6 731 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 MCPH1Q8NEM0 835 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 NACC1Q96RE7 527 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 RPS6KC1Q96S38 1066 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 PRRX2Q99811 253 aa21.23■□□□□ 0.99
COL9A3-206ENST00000466532 LLPHQ9BRT6 129 aaKnown RBP21.23■□□□□ 0.99
COL9A3-206ENST00000466532 POLR3CQ9BUI4 534 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms