RNA–Protein interactions for RNA: ENST00000466411.1

CLDN4-204, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-204ENST00000466411 HAS1Q92839 578 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 COPS5Q92905 334 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 CALML4Q96GE6 196 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 CDK5RAP3Q96JB5 506 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 C16orf70Q9BSU1 422 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 C11orf84Q9BUA3 381 aaPredicted RBP7.72□□□□□ -1.17
CLDN4-204ENST00000466411 POLR3CQ9BUI4 534 aaPredicted RBP7.72□□□□□ -1.17
CLDN4-204ENST00000466411 OSBPL7Q9BZF2 842 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 UNC45AQ9H3U1 944 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 KCND2Q9NZV8 630 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 PKD2L1Q9P0L9 805 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 LRWD1Q9UFC0 647 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 GTF2IRD1Q9UHL9 959 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 PLAGL2Q9UPG8 496 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 PHLPP2Q6ZVD8 1323 aa7.72□□□□□ -1.17
CLDN4-204ENST00000466411 CEP295Q9C0D2 2601 aa7.71□□□□□ -1.17
CLDN4-204ENST00000466411 M0QZ92 97 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 DDX39AO00148 427 aaKnown RBP7.71□□□□□ -1.18
CLDN4-204ENST00000466411 CHMP2AO43633 222 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 CCNE2O96020 404 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 AMHP03971 560 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 PROS1P07225 676 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 ZNF286BP0CG31 522 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 PMLP29590 882 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 HOXC8P31273 242 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 ABCD1P33897 745 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 CTNNB1P35222 781 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 UBA7P41226 1012 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 TOB1P50616 345 aaPredicted RBP7.71□□□□□ -1.18
CLDN4-204ENST00000466411 SP4Q02446 784 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 SPIRE1Q08AE8 756 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 PTK7Q13308 1070 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 SLC39A14Q15043 492 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 STK38Q15208 465 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 ZNF174Q15697 407 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 PLEKHG4Q58EX7 1191 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 ZNF618Q5T7W0 954 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 UTP14CQ5TAP6 766 aaKnown RBP7.71□□□□□ -1.18
CLDN4-204ENST00000466411 NCAPH2Q6IBW4 605 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 SWSAP1Q6NVH7 229 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 LRSAM1Q6UWE0 723 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 TMEM184AQ6ZMB5 413 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 NME8Q8N427 588 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 SPPL3Q8TCT6 385 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 SLC7A3Q8WY07 619 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 NACC1Q96RE7 527 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 MAP7D2Q96T17 732 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 YME1L1Q96TA2 773 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 LXNQ9BS40 222 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 TIPINQ9BVW5 301 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 LRRC27Q9C0I9 530 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 ANKEF1Q9NU02 776 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 CHMP5Q9NZZ3 219 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 GABBR1Q9UBS5 961 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 CCDC39Q9UFE4 941 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 TUBE1Q9UJT0 475 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 PCDHB6Q9Y5E3 794 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 SRPRBQ9Y5M8 271 aaKnown RBP7.71□□□□□ -1.18
CLDN4-204ENST00000466411 WDFY3Q8IZQ1 3526 aa7.71□□□□□ -1.18
CLDN4-204ENST00000466411 DMXL2Q8TDJ6 3036 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 TTC3P53804 2025 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 PRR5-ARHGAP8B1AHC4 643 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 ADAMTS3O15072 1205 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 SPTLC2O15270 562 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 SMIM10L2AP0DMW4 78 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 SMIM10L2BP0DMW5 78 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 YWHABP31946 246 aaKnown RBP7.7□□□□□ -1.18
CLDN4-204ENST00000466411 TECP42680 631 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 NRIP1P48552 1158 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 ARHGAP8P85298 464 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 PRKCEQ02156 737 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 TBC1D8BQ0IIM8 1120 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 PCBP1Q15365 356 aaKnown RBP eCLIP7.7□□□□□ -1.18
CLDN4-204ENST00000466411 GRIK4Q16099 956 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 KMT5BQ4FZB7 885 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 PPM1JQ5JR12 505 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 IER5Q5VY09 327 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 SYCE2Q6PIF2 218 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 SERINC5Q86VE9 423 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 CCDC60Q8IWA6 550 aaPredicted RBP7.7□□□□□ -1.18
CLDN4-204ENST00000466411 MCPH1Q8NEM0 835 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 RASSF8Q8NHQ8 419 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 TCP11Q8WWU5 503 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 KAT2BQ92831 832 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 IPO9Q96P70 1041 aaKnown RBP7.7□□□□□ -1.18
CLDN4-204ENST00000466411 HSD17B14Q9BPX1 270 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 EIF2AK1Q9BQI3 630 aaKnown RBP7.7□□□□□ -1.18
CLDN4-204ENST00000466411 RTP3Q9BQQ7 232 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 NIFKQ9BYG3 293 aaKnown RBP7.7□□□□□ -1.18
CLDN4-204ENST00000466411 CUEDC2Q9H467 287 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 MAGEF1Q9HAY2 307 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 DACH1Q9UI36 760 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 DBR1Q9UK59 544 aaKnown RBP7.7□□□□□ -1.18
CLDN4-204ENST00000466411 SQORQ9Y6N5 450 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 IGF2RP11717 2491 aa7.7□□□□□ -1.18
CLDN4-204ENST00000466411 KIAA1671Q9BY89 1806 aa7.69□□□□□ -1.18
CLDN4-204ENST00000466411 PLXNA4Q9HCM2 1894 aa7.69□□□□□ -1.18
CLDN4-204ENST00000466411 SMIM35A0A1B0GVV1 85 aa7.69□□□□□ -1.18
CLDN4-204ENST00000466411 MBLAC1A4D2B0 266 aaPredicted RBP7.69□□□□□ -1.18
CLDN4-204ENST00000466411 VWA3AA6NCI4 1184 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms