RNA–Protein interactions for RNA: ENST00000465461.6

CUX1-207, Transcript of cut like homeobox 1, humanhuman

TSL 3

Gene CUX1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-207ENST00000465461 ZNF623O75123 536 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 OFD1O75665 1012 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 CSPG5O95196 566 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 EOMESO95936 686 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 MAPTP10636 758 aaKnown RBP12.83□□□□□ -0.36
CUX1-207ENST00000465461 CMA1P23946 247 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 NDUFA8P51970 172 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 ZNF131P52739 623 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 EFNA5P52803 228 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 SMTNP53814 917 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 NCKAP1LP55160 1127 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 PCBP1Q15365 356 aaKnown RBP eCLIP12.83□□□□□ -0.36
CUX1-207ENST00000465461 EPC2Q52LR7 807 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 SPOUT1Q5T280 376 aaKnown RBP12.83□□□□□ -0.36
CUX1-207ENST00000465461 ATF7IP2Q5U623 682 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 SLC27A1Q6PCB7 646 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 HAUS6Q7Z4H7 955 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 MRPL10Q7Z7H8 261 aaKnown RBP12.83□□□□□ -0.36
CUX1-207ENST00000465461 ZBTB33Q86T24 672 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 TMEM192Q8IY95 271 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 ABI1Q8IZP0 508 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 FSIP1Q8NA03 581 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 HPS3Q969F9 1004 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 ZBTB45Q96K62 511 aaPredicted RBP12.83□□□□□ -0.36
CUX1-207ENST00000465461 PRIMPOLQ96LW4 560 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 FGFBP2Q9BYJ0 223 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 TRIM6Q9C030 488 aaPredicted RBP12.83□□□□□ -0.36
CUX1-207ENST00000465461 CXCL16Q9H2A7 254 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 IKZF4Q9H2S9 585 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 TMEM134Q9H6X4 195 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 PANK4Q9NVE7 773 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 KBTBD4Q9NVX7 518 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 CHMP5Q9NZZ3 219 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 KLK14Q9P0G3 267 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 LARSQ9P2J5 1176 aaKnown RBP12.83□□□□□ -0.36
CUX1-207ENST00000465461 HPSEQ9Y251 543 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 PHLPP2Q6ZVD8 1323 aa12.83□□□□□ -0.36
CUX1-207ENST00000465461 ACTN4O43707 911 aaKnown RBP12.82□□□□□ -0.36
CUX1-207ENST00000465461 SKIP12755 728 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 ITGA4P13612 1032 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 IGFBP4P22692 258 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 CTNNB1P35222 781 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 PBX3P40426 434 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 RAB27AP51159 221 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 FAM178BQ8IXR5 827 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 FBXO22Q8NEZ5 403 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 PGBD4Q96DM1 585 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 ACO2Q99798 780 aaKnown RBP12.82□□□□□ -0.36
CUX1-207ENST00000465461 TMEM117Q9H0C3 514 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 TNMDQ9H2S6 317 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 CWH43Q9H720 699 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 MIOSQ9NXC5 875 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 SNTG2Q9NY99 539 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 PARP2Q9UGN5 583 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 CIZ1Q9ULV3 898 aaPredicted RBP12.82□□□□□ -0.36
CUX1-207ENST00000465461 KIAA1671Q9BY89 1806 aa12.82□□□□□ -0.36
CUX1-207ENST00000465461 NLRC5Q86WI3 1866 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 N4BP3O15049 544 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 LPXNO60711 386 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 POMCP01189 267 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 MYBP10242 640 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 HARSP12081 509 aaKnown RBP12.81□□□□□ -0.36
CUX1-207ENST00000465461 BMPR1AP36894 532 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 MLH1P40692 756 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 SYKP43405 635 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 CASP5P51878 434 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 OSTNP61366 133 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 STRN3Q13033 797 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 CUL4BQ13620 913 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 SEZ6Q53EL9 994 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 HERC4Q5GLZ8 1057 aaPredicted RBP12.81□□□□□ -0.36
CUX1-207ENST00000465461 FAM43BQ6ZT52 329 aaPredicted RBP12.81□□□□□ -0.36
CUX1-207ENST00000465461 CEP120Q8N960 986 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 GLIS3Q8NEA6 775 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 PPM1EQ8WY54 764 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 CCDC51Q96ER9 411 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 PAGE5Q96GU1 130 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 ZFP42Q96MM3 310 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 GAD1Q99259 594 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 MRPL4Q9BYD3 311 aaKnown RBP12.81□□□□□ -0.36
CUX1-207ENST00000465461 TRIM9Q9C026 710 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 GBP3Q9H0R5 595 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 RSAD1Q9HA92 442 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 ALG13Q9NP73 1137 aaKnown RBP12.81□□□□□ -0.36
CUX1-207ENST00000465461 TBX20Q9UMR3 447 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 TNFSF13BQ9Y275 285 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 GDAQ9Y2T3 454 aa12.81□□□□□ -0.36
CUX1-207ENST00000465461 COL4A4P53420 1690 aaPredicted RBP12.8□□□□□ -0.36
CUX1-207ENST00000465461 A0A1W2PQ27 194 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 A0A1W2PQ64 194 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 A0A1W2PQD8 194 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 TISP43B9A030 160 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 NT5C1B-RDH14C9J2C7 533 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 HOXA2O43364 376 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 B4GALT3O60512 393 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 GADD45BO75293 160 aaPredicted RBP12.8□□□□□ -0.36
CUX1-207ENST00000465461 DDHD2O94830 711 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 FOSL2P15408 326 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 ASIC1P78348 528 aa12.8□□□□□ -0.36
CUX1-207ENST00000465461 KCNA1Q09470 495 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms