RNA–Protein interactions for RNA: ENST00000465425.1

SYNE4-204, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 2

Gene SYNE4, Length 2,339 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-204ENST00000465425 MFAP3P55082 362 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 MESDQ14696 234 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 XKR9Q5GH70 373 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 SEL1L2Q5TEA6 688 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 AGBL2Q5U5Z8 902 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 MICALCLQ6ZW33 695 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 C4orf19Q8IY42 314 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 ATP8B4Q8TF62 1192 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 LPAR1Q92633 364 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 KAT5Q92993 513 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 ASTN2O75129 1339 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-204ENST00000465425 CCDC169A6NNP5 214 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 NCKAP1LP55160 1127 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 PSMC5P62195 406 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 MAP2K1Q02750 393 aaPredicted RBP19.74■□□□□ 0.75
SYNE4-204ENST00000465425 SPP2Q13103 211 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 SNRNP35Q16560 246 aaKnown RBP19.74■□□□□ 0.75
SYNE4-204ENST00000465425 DUPD1Q68J44 220 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 NLRP14Q86W24 1093 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 JAMLQ86YT9 394 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 PLEKHO2Q8TD55 490 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 RPS6KC1Q96S38 1066 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 ZSWIM1Q9BR11 485 aa19.74■□□□□ 0.75
SYNE4-204ENST00000465425 PPANQ9NQ55 473 aaKnown RBP19.74■□□□□ 0.75
SYNE4-204ENST00000465425 PMM2O15305 246 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 PHF2O75151 1096 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 PPFIA2O75334 1257 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 GZMAP12544 262 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 JAK3P52333 1124 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 SEC24CP53992 1094 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 EIF3BP55884 814 aaKnown RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 RPS6P62753 249 aaKnown RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 RASA3Q14644 834 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 TCEAL1Q15170 157 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 UGCGQ16739 394 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 SPDYCQ5MJ68 293 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 FAM71AQ8IYT1 594 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 ZNF473Q8WTR7 871 aaKnown RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 KRT35Q92764 455 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 TAAR1Q96RJ0 339 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 CCT8L2Q96SF2 557 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 MAP3K20Q9NYL2 800 aaKnown RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 NOVA2Q9UNW9 492 aaKnown RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 PSME4Q14997 1843 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 SRRM3A6NNA2 597 aaPredicted RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 WDR64B1ANS9 1081 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 CYP26A1O43174 497 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 FAM107AO95990 144 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 COMTP21964 271 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 CHRNA3P32297 505 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 LIG3P49916 1009 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 PGM5Q15124 567 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 AADACL2Q6P093 401 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 NOP9Q86U38 636 aaKnown RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 MTMR14Q8NCE2 650 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 MYCBPAPQ8TBZ2 947 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 CCDC127Q96BQ5 260 aa19.73■□□□□ 0.75
SYNE4-204ENST00000465425 CHORDC1Q9UHD1 332 aaPredicted RBP19.73■□□□□ 0.75
SYNE4-204ENST00000465425 ADRB2P07550 413 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 SFNP31947 248 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 PLTPP55058 493 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 PPP2R2AP63151 447 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 GHRHRQ02643 423 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 DMP1Q13316 513 aaPredicted RBP19.72■□□□□ 0.75
SYNE4-204ENST00000465425 PLA2G4FQ68DD2 849 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 KRT39Q6A163 491 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 SLC47A2Q86VL8 602 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 CBWD2Q8IUF1 395 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 AGBL3Q8NEM8 1001 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 MORC4Q8TE76 937 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 C18orf8Q96DM3 657 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 WNT8AQ9H1J5 351 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 SLC38A10Q9HBR0 1119 aa19.72■□□□□ 0.75
SYNE4-204ENST00000465425 NOCTQ9UK39 431 aaKnown RBP19.72■□□□□ 0.75
SYNE4-204ENST00000465425 TESPA1A2RU30 521 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-204ENST00000465425 ATMINO43313 823 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-204ENST00000465425 SPOPO43791 374 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 MAGOHBQ96A72 148 aaKnown RBP19.71■□□□□ 0.75
SYNE4-204ENST00000465425 SAAL1Q96ER3 474 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 PCDHB18PQ96TA0 734 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 RMDN3Q96TC7 470 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 TBX20Q9UMR3 447 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 ATXN2Q99700 1313 aaKnown RBP19.71■□□□□ 0.75
SYNE4-204ENST00000465425 WNT10BO00744 389 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 GGPS1O95749 300 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 CNGA1P29973 690 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 MARCKSL1P49006 195 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 PDE6CP51160 858 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 MAGOHP61326 146 aaKnown RBP19.71■□□□□ 0.75
SYNE4-204ENST00000465425 KRT76Q01546 638 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 NBPF9Q3BBW0 867 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 PACS2Q86VP3 889 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 HOOK3Q86VS8 718 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 ZNF564Q8TBZ8 553 aaPredicted RBP19.71■□□□□ 0.75
SYNE4-204ENST00000465425 KREMEN1Q96MU8 473 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 ZDHHC18Q9NUE0 388 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 SLC12A6Q9UHW9 1150 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 SNX24Q9Y343 169 aa19.71■□□□□ 0.75
SYNE4-204ENST00000465425 MMEP08473 750 aa19.7■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms