RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 RSAD1Q9HA92 442 aa16.86■□□□□ 0.29
HDAC6-214ENST00000465269 SMCO2A6NFE2 343 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 CCDC69A6NI79 296 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 CHMP2AO43633 222 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 PAPLNO95428 1278 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 FOSP01100 380 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-214ENST00000465269 SFPQP23246 707 aaKnown RBP eCLIP16.85■□□□□ 0.29
HDAC6-214ENST00000465269 DSG1Q02413 1049 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 MTERF2Q49AM1 385 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 LAIR1Q6GTX8 287 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 LILRA6Q6PI73 481 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 ELMSAN1Q6PJG2 1045 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 MICU3Q86XE3 530 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 RHPN2Q8IUC4 686 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 RNF168Q8IYW5 571 aaPredicted RBP16.85■□□□□ 0.29
HDAC6-214ENST00000465269 ING5Q8WYH8 240 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 BORCS6Q96GS4 357 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 FAM167AQ96KS9 214 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 NLRP4Q96MN2 994 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 PLA2G2FQ9BZM2 168 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 PLEKHA4Q9H4M7 779 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 HEBP1Q9NRV9 189 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 ZDHHC7Q9NXF8 308 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 RAB23Q9ULC3 237 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 NDRG2Q9UN36 371 aaKnown RBP16.85■□□□□ 0.29
HDAC6-214ENST00000465269 CNTNAP5Q8WYK1 1306 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 RALGAPA1Q6GYQ0 2036 aa16.85■□□□□ 0.29
HDAC6-214ENST00000465269 FLNBO75369 2602 aaKnown RBP16.84■□□□□ 0.29
HDAC6-214ENST00000465269 DMXL2Q8TDJ6 3036 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 CARNS1A5YM72 827 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 CCL16O15467 120 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 ZMYND10O75800 440 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 SKIP12755 728 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 HOXC13P31276 330 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 CLK2P49760 499 aaKnown RBP16.84■□□□□ 0.29
HDAC6-214ENST00000465269 UBXN11Q5T124 520 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 CASC1Q6TDU7 716 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 CHD1LQ86WJ1 897 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 SMAP1Q8IYB5 467 aaPredicted RBP16.84■□□□□ 0.29
HDAC6-214ENST00000465269 COLGALT2Q8IYK4 626 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 CRYGNQ8WXF5 182 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 PGBD4Q96DM1 585 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 GPR62Q9BZJ7 368 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 RNF39Q9H2S5 420 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 NRBP2Q9NSY0 501 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 MIOSQ9NXC5 875 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 CACNG4Q9UBN1 327 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 DPP7Q9UHL4 492 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 POLIQ9UNA4 740 aa16.84■□□□□ 0.29
HDAC6-214ENST00000465269 C1QTNF9BB2RNN3 333 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 RETP07949 1114 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 C1QTNF9P0C862 333 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 RAB27AP51159 221 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 TARBP2Q15633 366 aaKnown RBP16.83■□□□□ 0.28
HDAC6-214ENST00000465269 CCDC6Q16204 474 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 PRR16Q569H4 304 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 POTEHQ6S545 545 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 PRSS55Q6UWB4 352 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-214ENST00000465269 MRPL10Q7Z7H8 261 aaKnown RBP16.83■□□□□ 0.28
HDAC6-214ENST00000465269 FANCBQ8NB91 859 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 CEP89Q96ST8 783 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 PHF20Q9BVI0 1012 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 DISC1Q9NRI5 854 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 RXFP3Q9NSD7 469 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 TBC1D22BQ9NU19 505 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 HCFC1R1Q9NWW0 138 aa16.83■□□□□ 0.28
HDAC6-214ENST00000465269 SUCLA2Q9P2R7 463 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-214ENST00000465269 SEPT9Q9UHD8 586 aaPredicted RBP16.83■□□□□ 0.28
HDAC6-214ENST00000465269 WDR64B1ANS9 1081 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 CALM1P0DP23 149 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 CALM2P0DP24 149 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 CALM3P0DP25 149 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 SCNN1GP51170 649 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 ZNF710Q8N1W2 664 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 HDAC7Q8WUI4 952 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 RSPH1Q8WYR4 309 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 ZFP42Q96MM3 310 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 GAD1Q99259 594 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 MINDY3Q9H8M7 445 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 CHST7Q9NS84 486 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 AGPAT5Q9NUQ2 364 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 STK39Q9UEW8 545 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 ZMIZ1Q9ULJ6 1067 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 SSX2IPQ9Y2D8 614 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 HES2Q9Y543 173 aa16.82■□□□□ 0.28
HDAC6-214ENST00000465269 V9GY48 417 aaPredicted RBP16.82■□□□□ 0.28
HDAC6-214ENST00000465269 NOTCH4Q99466 2003 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 HRO43593 1189 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 PROS1P07225 676 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 MLH1P40692 756 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 MAGEA9P43362 315 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 RPS9P46781 194 aaKnown RBP16.81■□□□□ 0.28
HDAC6-214ENST00000465269 AP3B2Q13367 1082 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 SIM2Q14190 667 aaPredicted RBP16.81■□□□□ 0.28
HDAC6-214ENST00000465269 SF3A2Q15428 464 aaKnown RBP16.81■□□□□ 0.28
HDAC6-214ENST00000465269 CSRP2Q16527 193 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 MTSS1LQ765P7 747 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 ZNF687Q8N1G0 1237 aa16.81■□□□□ 0.28
HDAC6-214ENST00000465269 SMG8Q8ND04 991 aaKnown RBP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms