RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 EDIL3O43854 480 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 GLULP15104 373 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 USP11P51784 963 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 DSG1Q02413 1049 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 HTR4Q13639 388 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 KIAA0319Q5VV43 1072 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 ANO5Q75V66 913 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 PALB2Q86YC2 1186 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 COLGALT2Q8IYK4 626 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 RNF168Q8IYW5 571 aaPredicted RBP13.47□□□□□ -0.25
TRA2B-208ENST00000465245 ST13P5Q8NFI4 369 aaPredicted RBP13.47□□□□□ -0.25
TRA2B-208ENST00000465245 CNTNAP3BQ96NU0 1288 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 CNTNAP3Q9BZ76 1288 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 NT5C3AQ9H0P0 336 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 PLEKHA4Q9H4M7 779 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 MINDY3Q9H8M7 445 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 RXFP1Q9HBX9 757 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 ZDHHC7Q9NXF8 308 aa13.47□□□□□ -0.25
TRA2B-208ENST00000465245 ANHXE9PGG2 379 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 LRRN2O75325 713 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 ITGA4P13612 1032 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 NCLP19338 710 aaKnown RBP13.46□□□□□ -0.25
TRA2B-208ENST00000465245 MLH1P40692 756 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 Q4G0T1 1027 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 UBXN11Q5T124 520 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 SRGAP1Q7Z6B7 1085 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 GLYCTKQ8IVS8 523 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 SUMF1Q8NBK3 374 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 CNNM3Q8NE01 707 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 TBCKQ8TEA7 893 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 SLC7A3Q8WY07 619 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 SHDQ96IW2 340 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 PRKD2Q9BZL6 878 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 UBN1Q9NPG3 1134 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 VPS54Q9P1Q0 977 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 NCDNQ9UBB6 729 aa13.46□□□□□ -0.25
TRA2B-208ENST00000465245 NID2Q14112 1375 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 ARL5CA6NH57 179 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 F8W810 466 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 SPTLC1O15269 473 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 TGM5O43548 720 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 GAS2O43903 313 aaKnown RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 NR1I2O75469 434 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 KRT37O76014 449 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 ERLIN2O94905 339 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 PAPLNO95428 1278 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 TDP2O95551 362 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 EFEMP2O95967 443 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 SRGAP2CP0DJJ0 459 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 HOXA11P31270 313 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 STARD6P59095 220 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 PSMC5P62195 406 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 KRT32Q14532 448 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 B3GNT9Q6UX72 402 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 RASEFQ8IZ41 740 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 MAML2Q8IZL2 1156 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 SMG8Q8ND04 991 aaKnown RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 PRPF31Q8WWY3 499 aaKnown RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 PSPC1Q8WXF1 523 aaKnown RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 FGF14Q92915 247 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 B3GALT6Q96L58 329 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 GAD1Q99259 594 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 BCO2Q9BYV7 579 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 SPATA6Q9NWH7 488 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 IPPQ9Y573 584 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 ZFP37Q9Y6Q3 630 aaPredicted RBP13.45□□□□□ -0.26
TRA2B-208ENST00000465245 ZFHX4Q86UP3 3567 aa13.45□□□□□ -0.26
TRA2B-208ENST00000465245 KANSL1LA0AUZ9 987 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 LAMTOR5O43504 91 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 C1RP00736 705 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 HMGB1P09429 215 aaKnown RBP13.44□□□□□ -0.26
TRA2B-208ENST00000465245 SDHBP21912 280 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 FSHRP23945 695 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 SCNN1GP51170 649 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 NPEPPSP55786 919 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 NLRP5P59047 1200 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 DSC1Q08554 894 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 LAMTOR4Q0VGL1 99 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 SNW1Q13573 536 aaKnown RBP13.44□□□□□ -0.26
TRA2B-208ENST00000465245 ZNF528Q3MIS6 628 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 TSGA10IPQ3SY00 556 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 VARS2Q5ST30 1063 aaKnown RBP13.44□□□□□ -0.26
TRA2B-208ENST00000465245 Q6ZUG5 572 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 BRF1Q92994 677 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 TMEM143Q96AN5 459 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 CEP170P1Q96L14 293 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 SLC26A6Q9BXS9 759 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 EIF2AQ9BY44 585 aaKnown RBP13.44□□□□□ -0.26
TRA2B-208ENST00000465245 RNF26Q9BY78 433 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-208ENST00000465245 C22orf23Q9BZE7 217 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 CHST7Q9NS84 486 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 BMP2KQ9NSY1 1161 aaPredicted RBP13.44□□□□□ -0.26
TRA2B-208ENST00000465245 FBXO4Q9UKT5 387 aa13.44□□□□□ -0.26
TRA2B-208ENST00000465245 CPA1P15085 419 aa13.43□□□□□ -0.26
TRA2B-208ENST00000465245 RPL17P18621 184 aaKnown RBP13.43□□□□□ -0.26
TRA2B-208ENST00000465245 QARSP47897 775 aaKnown RBP13.43□□□□□ -0.26
TRA2B-208ENST00000465245 GPC5P78333 572 aa13.43□□□□□ -0.26
TRA2B-208ENST00000465245 CREMQ03060 361 aa13.43□□□□□ -0.26
TRA2B-208ENST00000465245 UBXN2BQ14CS0 331 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms